Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01251 atgtccattggtcaaggagttgacagcaaagCTACACTTATTTCTGCAACCAACAACTTCTCCGCCAATAATATATTGGGAAAAGGCGGTTTTGAAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATGAAGAGAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATCATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGGCATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACCTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTTGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGACGACGCATCGAATTTATGTGGAGTCATAAGAGCGATTCATGTTGGTCTACTATGCGTCCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCCACTGCCTCAACCGAAAATGCCGGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTAGTGAGCTGCATCCAAGGTAG 1020 0.3941 MSIGQGVDSKATLISATNNFSANNILGKGGFEAVYKGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFDEERGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWPLPQPKMPGFFTERDPVGDTSSSGNTKVVSINEVTISELHPR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01251 339 SUPERFAMILY Protein kinase-like (PK-like) 10 293 IPR011009 -
Aip08g01251 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Aip08g01251 339 Pfam Domain of unknown function (DUF3403) 294 339 IPR021820 GO:0004674
Aip08g01251 339 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 313 - -
Aip08g01251 339 SMART serkin_6 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01251 339 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01251 339 CDD STKc_IRAK 26 293 - -
Aip08g01251 339 Gene3D Transferase(Phosphotransferase) domain 1 96 298 - -
Aip08g01251 339 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 11 313 - -
Aip08g01251 339 Gene3D Phosphorylase Kinase; domain 1 8 95 - -
Aip08g01251 339 Pfam Protein tyrosine and serine/threonine kinase 23 288 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01251 Aip-Chr8 18615113 18618223 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01251 12 339 Receptor kinase-like Gene Family AT4G23140 52.059 2.74e-118 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01251 PK_Tyr_Ser-Thr 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01251 - - ahf:114925771 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01251 08 18615113 18618223 Aip08g01251 08 18615113 18618223 ECH