Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01249 ATGCACATAGCAAAACTTCAGCACAGGAATTTGGCGAAGCTTCTAGGATGTTGCATTCAAGTGAAAGAAAGGATGCTGGTCTATGAGTTTATGCCAGATAAAAGCTTGGACCACTTCATATTTGATGGTGACAAAGGCATATTACTAGACTGGCCTAAGCGTTTTCTCATTATAAATGGTATTGCACTGGGCCTTCTATATCTTCATCAAGACTCGAGGCATAGAGTAATACATAGAGATCTCAAGGCTGGAAATATTTTGTTAGATATTGAAATAAATCCAAAAATCTCATACTTTGGCCTGGCAAGAAGCATCCTAGGAAACAAAAATGAAGCAACCACAAATCATGTTGTTGGAACTTATGGCTATATGGCACCAGAGTACATAATTGATGGACTATTCTCAACAAAATCCGATATCTATAGCTTTGGTGTGTTAGTGTTGGAAATAGTTAGTGGAAAGAGCAATAGAGCATTCAACCATAGATATCACCACTTTAGTCTTCTCGGGCATGCATCGACATTTTTCATAGAAGACAAGTCCTTAGATATAGTTGATGCATCTATCAGAGACTCAATTAATTTACCAGAAGTCATGAGATCGATTCATGTGGGTCTGTTATGCGTGCAACAAAGTCTAGAGGATCGGCCAAACATGTCATACGTGCTTAAGGTGCTGAGTAGTGAATGGGAATTGCCTCAACCGAAAAAGCTTGGATTCTTCACTCAGAGAGATTTGGTTGGTGGCAGTTCTTCGTCAAGCAGCAGCAACAACAAAGTATTGTCAATTAATAAACTCTCGGTTAGTGAGGTTGATCCACGGTAG 825 0.3939 MHIAKLQHRNLAKLLGCCIQVKERMLVYEFMPDKSLDHFIFDGDKGILLDWPKRFLIINGIALGLLYLHQDSRHRVIHRDLKAGNILLDIEINPKISYFGLARSILGNKNEATTNHVVGTYGYMAPEYIIDGLFSTKSDIYSFGVLVLEIVSGKSNRAFNHRYHHFSLLGHASTFFIEDKSLDIVDASIRDSINLPEVMRSIHVGLLCVQQSLEDRPNMSYVLKVLSSEWELPQPKKLGFFTQRDLVGGSSSSSSSNNKVLSINKLSVSEVDPR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01249 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Aip08g01249 274 Pfam Protein tyrosine and serine/threonine kinase 3 223 IPR001245 GO:0004672|GO:0006468
Aip08g01249 274 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 246 - -
Aip08g01249 274 Gene3D Transferase(Phosphotransferase) domain 1 31 236 - -
Aip08g01249 274 SUPERFAMILY Protein kinase-like (PK-like) 3 233 IPR011009 -
Aip08g01249 274 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Aip08g01249 274 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 1 246 - -
Aip08g01249 274 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01249 274 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01249 Aip-Chr8 18578748 18579969 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01249 3 274 Receptor kinase-like Gene Family AT4G05200 49.110 6.84e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01249 PK_Tyr_Ser-Thr 3.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01249 - - ahf:112769706 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01249 08 18578748 18579969 Aip08g01249 08 18578748 18579969 ECH