Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g01246 | ATGGAAAGGTTCATCACCTTGCTTCTGTTGTGCTTTTCATTGTTGCACGATACTGCCATTTCCATTACCATAGAAACCATTAGCACTTCACAATCCCTCACTGATGCTGACATCATGCTTTCACCTAGCAGAACCTTTGCATTGGGATTCTTCAGTAGTCCAGAAAATTCCAAAAATCGTTACCTTGGAATATGGTACAATAGAGTATCAACAACCACCGTTGTATGGGTTGCCAATAGAAACAAACCACTCTACCACTCATCCGGAGAGTTGAAGATCGCCAAAGACGGGATTCTAGAGCTTTACAACAGTAGCACCATTGCTTGGTCTTCCAACTCATCAAGATTTTCACAGAAACCCGTTATTGCGGTTCTTTTGGATTCTGGTAACTTCGTTGTGAAGGAAGCAGTCAGAAACAATGACGATTCAACAAGTTTTCTTTGGCAGAGTTTTGATTACCCTGGTGACACTTTGCTACCAGGGATGAAGCTTGGAATCGATTTAACAACCGGCATGAATAGGTACCTAACTTCGTGGACAAGCCGCGATGATCCATCTTCAGGCAACTACACATTTCAGCTTGATATCACTGGGTATCCGCGATTATGTATAAGAAATGGCGAATCCAAGGAGCATTGTGGTGGATCTTGGAATGGTGTTCGGTTTAGTGGAATTCCTCTGCTAAAACAGAATTCCATATTCAACTATTACTTTGTCTCTAACCAAGAAGAGATATATTATACATTTGAGCTTGTTAATAGCTCAGTCTATTCAAGGTTTTCGCTAACCGTGGATGGAATCATGACGCGTTATGTCTGGAATGCTAAGAATCAAAGCTGGAGCATCTATCTAGCAGTACCAAAGGACTTGTGTGATTATTATGGCAAATGCGGCGTGTATGGTAGTTGTAACATAGACAACTCCCCAGTATGTGGATGCTTGAAAGGATTTGAACCTAGGGTCCCAGAAGAATGGAATCAAGCTGATTGGTCTAATGGCTGCAACAGAACTAATTCGTTAAGCTGTCGCGGAGATGGATTCGCGAAATTTTCTAGTCTCAAGTTACCGGACACAGAGAGGACATCATGGTTAAACAAAACTCTGAGCCTTGTGGAATGTGCTGAAATCTGCATCAGAAACTGCTCTTGCACTGCTTATGCTGCATTAGATATCAGGAAAGAGGCAAGTGGATGTTTACTGTGGTATGGTGACTTAATAGATATTAGAGTACTGAATGATCCACAACAAGATATTTATGTCAGAATGTCAAAGAAAGATCTAGATGAAGATGAAAATTTGAAACACAAATCCGACATCCGAAAGCTGCAGATTATTGTTTCTAGCTCAGTCATATCTGTAGGGATTTTGATCCTCTGTCTATCCTTCACCCTGTATAGATGCAAGAAGTACAAAAAAAACTATAGAAGCATGAGAGGCAAACCAGAAACAGATGCACATGCAATACAAGAGCATCAAAAGGAGGAAGAACTAGATCTACCCTTGTTTGATTTAGCTACAGTTATTTCTGCAACCGATAACTTCTCTATCAATAACATCTTGGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGGAAGATGGAAGAGAAATAGCTGTTAAGAGACTCTCAGAAAATACTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTAATGCATATAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGATGTTGCATTGAAGCAGATGAAAGGATGTTGGTGTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAATGAGAGGAGCATATTATTAGATTGGCCTCAACGCTTTCTTATCATTATTGGCATTGCACGAGGTCTTCTTTATCTCCATCAAGATTCAAGACATAGAATAATTCATAGAGATCTTAAAGCTGGAAATATTTTGTTAGATAATGAAATGAATGCTAAGATTTCTGACTTTGGATTAGCCCGAAGCTTTGCAGGAAATGAAAATGAAGCAAGTACAGTAACTATTGTTGGAACTTATGGATATTTATCACCAGAGTATCTTATTGATGGAATATTCTCAACAAAATCTGATGTCTACAGTTTTGGTGTGCTACTATTAGAGATTGTTAGTGGAAAGAGAAATAGAGGATTCAGCAATAAAAATCATCGCTTTAATCTTTTAGGGCATGTGTGGACATTTTTCATGGAAGGTAACTGCATAGAAATAGTTGACACATCCATCAGAAATGCAGCCAATTTATCCGAAGTCATGAGAGCAATTCATGTGGGCCTATTATGTGTGCAACAAAGTCCAGAAGACAGGCCGAGCATGTCGTATGTGCTTATGATGCTGAGTAGTGAATGGATATTGCCTCAACCAAAAATGCCTGGCTTCTTTACCGAGAGAGATTTGGTTGGTAGCAGCACCACTTCATCAATTAATGGACTCACAATCACTCAGATGGTTCCACGGTAG | 2478 | 0.3947 | MERFITLLLLCFSLLHDTAISITIETISTSQSLTDADIMLSPSRTFALGFFSSPENSKNRYLGIWYNRVSTTTVVWVANRNKPLYHSSGELKIAKDGILELYNSSTIAWSSNSSRFSQKPVIAVLLDSGNFVVKEAVRNNDDSTSFLWQSFDYPGDTLLPGMKLGIDLTTGMNRYLTSWTSRDDPSSGNYTFQLDITGYPRLCIRNGESKEHCGGSWNGVRFSGIPLLKQNSIFNYYFVSNQEEIYYTFELVNSSVYSRFSLTVDGIMTRYVWNAKNQSWSIYLAVPKDLCDYYGKCGVYGSCNIDNSPVCGCLKGFEPRVPEEWNQADWSNGCNRTNSLSCRGDGFAKFSSLKLPDTERTSWLNKTLSLVECAEICIRNCSCTAYAALDIRKEASGCLLWYGDLIDIRVLNDPQQDIYVRMSKKDLDEDENLKHKSDIRKLQIIVSSSVISVGILILCLSFTLYRCKKYKKNYRSMRGKPETDAHAIQEHQKEEELDLPLFDLATVISATDNFSINNILGKGGFGTVYQGMLEDGREIAVKRLSENTRQGLQEFKSEVMHIVKLQHRNLVKLLGCCIEADERMLVYEFMPNKSLDYFIFDNERSILLDWPQRFLIIIGIARGLLYLHQDSRHRIIHRDLKAGNILLDNEMNAKISDFGLARSFAGNENEASTVTIVGTYGYLSPEYLIDGIFSTKSDVYSFGVLLLEIVSGKRNRGFSNKNHRFNLLGHVWTFFMEGNCIEIVDTSIRNAANLSEVMRAIHVGLLCVQQSPEDRPSMSYVLMMLSSEWILPQPKMPGFFTERDLVGSSTTSSINGLTITQMVPR | 825 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g01246 | 825 | Gene3D | - | 20 | 151 | IPR036426 | - | |
Aip08g01246 | 825 | PIRSF | SRK | 1 | 825 | IPR024171 | GO:0004674 | |
Aip08g01246 | 825 | ProSiteProfiles | PAN/Apple domain profile. | 342 | 423 | IPR003609 | - | |
Aip08g01246 | 825 | Pfam | D-mannose binding lectin | 73 | 179 | IPR001480 | - | |
Aip08g01246 | 825 | CDD | PAN_AP_plant | 340 | 421 | - | - | |
Aip08g01246 | 825 | Gene3D | Transferase(Phosphotransferase) domain 1 | 590 | 790 | - | - | |
Aip08g01246 | 825 | Pfam | PAN-like domain | 342 | 408 | IPR003609 | - | |
Aip08g01246 | 825 | CDD | STKc_IRAK | 520 | 785 | - | - | |
Aip08g01246 | 825 | SUPERFAMILY | Protein kinase-like (PK-like) | 498 | 785 | IPR011009 | - | |
Aip08g01246 | 825 | PANTHER | - | 12 | 813 | - | - | |
Aip08g01246 | 825 | Gene3D | Hepatocyte Growth Factor | 340 | 422 | - | - | |
Aip08g01246 | 825 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 185 | IPR036426 | - | |
Aip08g01246 | 825 | SMART | blect_4 | 30 | 154 | IPR001480 | - | |
Aip08g01246 | 825 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 146 | IPR001480 | - | |
Aip08g01246 | 825 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 635 | 647 | IPR008271 | GO:0004672|GO:0006468 | |
Aip08g01246 | 825 | Pfam | Protein tyrosine and serine/threonine kinase | 516 | 783 | IPR001245 | GO:0004672|GO:0006468 | |
Aip08g01246 | 825 | CDD | B_lectin | 25 | 154 | IPR001480 | - | |
Aip08g01246 | 825 | PANTHER | S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED | 12 | 813 | - | - | |
Aip08g01246 | 825 | SMART | serkin_6 | 514 | 790 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01246 | 825 | ProSiteProfiles | Protein kinase domain profile. | 514 | 790 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01246 | 825 | SMART | ntp_6 | 342 | 422 | IPR003609 | - | |
Aip08g01246 | 825 | Pfam | S-locus glycoprotein domain | 215 | 320 | IPR000858 | GO:0048544 | |
Aip08g01246 | 825 | ProSitePatterns | Protein kinases ATP-binding region signature. | 520 | 542 | IPR017441 | GO:0005524 | |
Aip08g01246 | 825 | Gene3D | Phosphorylase Kinase; domain 1 | 475 | 589 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g01246 | Aip-Chr8 | 18536170 | 18540501 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g01246 | 468 | 825 | Receptor kinase-like Gene Family | AT4G11480 | 50.000 | 1.43e-115 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aip08g01246 | PK_Tyr_Ser-Thr | 8.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g01246 | - | - | ahf:112769704 | 1634.39 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip08g01246 | 08 | 18536170 | 18540501 | Aip08g01246 | 08 | 18536170 | 18540501 | ECH |