Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01231 ATGGAATACACTGGTCATAGCGAGAAATTCTACATGGAGGATGAAAGCGATTGTGTTGGCGATGTAGTCAGTTCAGATGCTGATGAATTTGATGCTGAGCAATTGGATCCAAGTGGGCAGAATGACGTATCGGATTATGGAGATGTATTTGGTCTTACCGCAGCTGAAATAGAGAACAAGGTTTTCAGAATGGAGGAGCGTGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGCAGTACGCAAGGGAGACTATGGGAAGGATGATGACGGAAATGTAATTAGGAGGAGATTCTTTTGCAACAGAGTTGGGTTAAGGGATGAAAAGCACTATAATAGATTAGATAGAAAAAGATGTCATAAGCCTGAGACACGAACAAACTGCCAGGCTAAGTTGTCGATATATCTTGACAAAGAAAGTTCGAACTGGAAGGTCCGGAAAGTCATCCTCGAGCACAACCATGAGTTAGTAGCTAGGTGTATGGTACACTTGATTCCAAAGTTCCGTCGGGTTTCAGGTGCGGCAAAGGATCAGCTAGATGGTATGCAAAGTTATGGGCTACCTACGTCAAAGATACTTGGGTACATGGCAGGGATTGCCGGGGGGTATTCACTATTGGGTTTCACAAAGAAGGATGCTTATAACTACCTTGACCAGACTAAGCACGCTAAGATCGCAGATGGGGATGCAAATTCTGCCATTGTCTATTTGGAGGGAAAGGCTTCTGTGGACCCCATGGCAATGGCGAGGTATAACCTGACTAAGGAGGGTATGTTGGCCaacttgttttgggccgatggaatgagcagagttgattaccaacactttggtgatgtcatcgcgttcgattcgacgtacaaaaagaacaagtaCAGGAGACCGCTTGTAATATTCTCGGGCGCAAACAACTACAAACAGACGACGATCTTCGGGTTCGGGTTAGTGTTGGACGAGACAATTGCTTCGTACAAGTGGATGCTAGAAAATTTCCTTGAGGTGATGTGTAATAAATTGCCATCTGTTGTAGTCACAGACGGTGATGATGCCATTATTGCCGCAGTTACGGAAGTTTTTCCTAGTGCTACCCATCGCCTATGTGCTTGGCATCTACAAAAGAATGTTACATCTAATGGGAACGAGAAGATGTTCAGGGACTTGTTTTCGAGGTGGTTGTATGCGGATATGTCGATAGATGACTTTGAAGCGGAATGGGCTGAAGCAGCGGATGAATACGGGTTACATGATAAGTTGTGGGCAATGCAGATGTACGAAAAAAGAAAGATGTGGGCGAATGCATACCTTCGTGACAAGTTCTGTGCTAGGTTTCGTACCACATCGCGATGCGAGGGTATAAATTCGCATGTGAAGAAATTCCTTAGCTCGAAGCACACTATACTGGAGCTTGTGCAAAATCTTGAGCTAGTCCTTCGTGAATACCGGAACAATGAGATGGTTGCACAGTTCAACTCCATTTATAATGTCCCTGTTATGACGACGTGCCTCAATCCAATCGAAAAATGTGCTGCCATGGTATATACACGGACCATTTTCACCAACGTGAAAAAGGAGATAGATGCGGTTGGAGCTCTAAACTTTGTTAGTAAGCGGAGGGTGTCAACGACGGTAGTTTACACAATGGAAGAGTATGGTAATCCCGGAAAGCCAGTGGTTACTTTGATCGACATGAACACAACAAAGTTGGAGTGTAGATGTAACTTTTGTGCTAAAGAGGGGATACCTTGTCGACATATATTTTTTGTGATGAAGCATGAGCACTTGAAGACAATTCCTCATCGGTTAATTTTGAAACGATGGCGAAAGGACGTTAAGGCCGTTGAAGACTACTCGGAGAAGAAGGACGTGGCCGATGATCGGGGATTCTTGCTTCAGCATGGTGCCTTACATGCGGCGGCTCAGTGGTTGTTGTTTCTTAGTGCGCAGAGCCATGAGCTATTTAATGTAGCGATGAGGGGAATTCGTAGCATGTGTGTTGACATGGAGGGATTGTGCGGGGATGGCTATGATCAGACCAACACAGATCCTGAAGTTGGTGTGCGTGATCCAACTGTCATGCGGACGAAGGGGGCTCCTAGTACCCGGGGGGTAAGGGATAGGAAAAGAAGATGCACGACTTGCAGGCGAACTGGGCACACCAAGCGAAGGTGCGTTGAAGGGTTCAAAAAGGCGTCTGTAAAGCTGCACGACTTGGAAGACGATGCTGATGTGACACCACACAAAGAAAAGGTTGGTCTAAACATGTTTCATGTTGTTGTGTTGAAATGGGTACCAAAGGGTAGAAGTGGTCAGGTGGATGGGGAAGAAGGCATAGCAGCCGATTGTGAGTTTGATCGCTTCATTGGAACAGCGCAAAGTGAGACGGTTAAAGCCAATGCGTGCATGCCGGAGGGAAATTGGGCTATTGAGGTGCTGGACCTCCTTCGTTCACTCCACGCACATGTTGAGTACAAATGA 2481 0.4426 MEYTGHSEKFYMEDESDCVGDVVSSDADEFDAEQLDPSGQNDVSDYGDVFGLTAAEIENKVFRMEERAYEFYMRFGKCHGFAVRKGDYGKDDDGNVIRRRFFCNRVGLRDEKHYNRLDRKRCHKPETRTNCQAKLSIYLDKESSNWKVRKVILEHNHELVARCMVHLIPKFRRVSGAAKDQLDGMQSYGLPTSKILGYMAGIAGGYSLLGFTKKDAYNYLDQTKHAKIADGDANSAIVYLEGKASVDPMAMARYNLTKEGMLANLFWADGMSRVDYQHFGDVIAFDSTYKKNKYRRPLVIFSGANNYKQTTIFGFGLVLDETIASYKWMLENFLEVMCNKLPSVVVTDGDDAIIAAVTEVFPSATHRLCAWHLQKNVTSNGNEKMFRDLFSRWLYADMSIDDFEAEWAEAADEYGLHDKLWAMQMYEKRKMWANAYLRDKFCARFRTTSRCEGINSHVKKFLSSKHTILELVQNLELVLREYRNNEMVAQFNSIYNVPVMTTCLNPIEKCAAMVYTRTIFTNVKKEIDAVGALNFVSKRRVSTTVVYTMEEYGNPGKPVVTLIDMNTTKLECRCNFCAKEGIPCRHIFFVMKHEHLKTIPHRLILKRWRKDVKAVEDYSEKKDVADDRGFLLQHGALHAAAQWLLFLSAQSHELFNVAMRGIRSMCVDMEGLCGDGYDQTNTDPEVGVRDPTVMRTKGAPSTRGVRDRKRRCTTCRRTGHTKRRCVEGFKKASVKLHDLEDDADVTPHKEKVGLNMFHVVVLKWVPKGRSGQVDGEEGIAADCEFDRFIGTAQSETVKANACMPEGNWAIEVLDLLRSLHAHVEYK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01231 826 Pfam MULE transposase domain 282 376 IPR018289 -
Aip08g01231 826 Pfam FAR1 DNA-binding domain 70 160 IPR004330 -
Aip08g01231 826 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 711 IPR031052 GO:0006355
Aip08g01231 826 MobiDBLite consensus disorder prediction 683 709 - -
Aip08g01231 826 ProSiteProfiles Zinc finger SWIM-type profile. 557 595 IPR007527 GO:0008270
Aip08g01231 826 PANTHER OS02G0262500 PROTEIN 57 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01231 Aip-Chr8 18275826 18279029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01231 MULE 1.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01231 - - ahf:112758792 885.945