Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01228 ATGGAAGACTTCACAATAATGATTCTCTTATGCTTATTTTTGATGAACCATATGGTGGCTTCCACTGCAAGGGACACTATTGATTCACTGCAATCTATCAGTGATGGTGAGAAAATAGTTTCAGCTGATGAAATCTTTGTATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATCTGGTATAACAAAGATCCAACAAAGGCAATAGTGTGGGTTGCAAACAGAGAAAAACCCCTCACTGGTTCCTCAGGGGTTCTGAAGCTCAACAACACGGGAATTCTAGTCCTTCTTGATCATAACAGCAGTCTTATTTGGTCCTCCAACGCAACAAGATCCATCCTGAATCCGGTTGCAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAACAAGCAACAATGGTGCTAAGGAAGAAGATTTCGTATGGCAAAGTTTTGATTATCCAGGCGACACGGTCTTGCCTGAACAGAAGTTAGGAATAAATCTGAAAACAGGACAGAATCGATATCTAACCTCATGGAGCAGCTCGGATGATCCGTTTCCAGGTAGATATACTTTACAAATCGATATCAAGGGATATCCTCAAGTATTCATTAAAGAAGGTGCAAACAAAAGATTTCGTGCCGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGGAAACCCAATCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAATAATTCAAACCCTCATAAAGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAGTACGGACACATCGACTTGGATCAACTTGGCAAGGTTACCGGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAATTTGTAGTTGTTTGGATGGATTTGTGCAAGATAATAATAAGAAGGAGCAAGGTTTATCAGATGGTTGTGTAAGAAGAACATCATTGGATTGTTATGGAGATGGGTTCTTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGATGTGCTTGAAGAATTGTTCATGTATGGCTTATGCAGCTTTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCCCTGAATCCAAATTCTCTTGAAGATATTTACTTAAGAATGGCTGCTACAGAACTAGGTATAAAGGAAAATAAATCACACAAATCAAATGTCCGAAAGAAAAAGACTATCATCATAATTTGTGCGTTATCTTCTAGTGTTCTAATCATATGCTTGGCCTTCATCGTCTTTAGATGGAAGATACGAAGGAAAGATGTAACAAGTGACCAACAAGAGGAAGATCCACAATTGCCTTTGTTTGATATGTCCACAATTTCTTCTGCAACAAATAATTTTTCAACCGATAGCATTTTGGGAAAAGGTGGCTTTGGTTCGGTATATAAGGGTGTATTAAAGGATGGAAAAGAAATAGCGGTTAAGAGACTCTTACAGAATTCAAGTCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAACTCCTAGGATGTTGCGTTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAGAAGAAGAGCATGTTACTAGATTGGACTAGGCGCTTTGACATTATCAATGGGATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAAGCTGCTAATATTTTATTAGACCGTGAAATGAATCCAAAAATTTCAGACTTTGGACTAGCTAGAAGTTTTGGAGGGAACGAAACAAAAGCAAACACAAGACATGTTGTTGGAACTTACGGATATTTATCACCAGAGTACATAATTGATGGAGTTTACTCAACAAAATCCGATGTATTCAGTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGAAATAGAAATAGAGGATTCATTCATCAAGATCATCAATTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTCATGCTCCAATAAGAGATACATCAAATTTATCTTCAATGTTAAGATCAATTCACGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAGAGGCCAAACATGTCATATGTTGTTCAAATGTTGACTAGTGAATCCACACTACCTCTACCTAAAATGCCTGGGTTCTTTTTAGAAAGAGAAATGGTTGATGAAGGTTCTTCTTCAAGTAATAACAGAACATGCTCAATCAATGATGTCACAAATAGCATAGTGGAGGCTAGATAG 2445 0.3714 MEDFTIMILLCLFLMNHMVASTARDTIDSLQSISDGEKIVSADEIFVLGFFSPGTSKNRYVGIWYNKDPTKAIVWVANREKPLTGSSGVLKLNNTGILVLLDHNSSLIWSSNATRSILNPVAKLLNSGNLVVQETSNNGAKEEDFVWQSFDYPGDTVLPEQKLGINLKTGQNRYLTSWSSSDDPFPGRYTLQIDIKGYPQVFIKEGANKRFRAGSWNGVQFSGTPQVKGNPIFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWSTDTSTWINLARLPADDCDYYETCGAYSSCNVNNYPICSCLDGFVQDNNKKEQGLSDGCVRRTSLDCYGDGFLKYSGLKLPDTERSWYSRNISIEDCKMMCLKNCSCMAYAALDISEGASGCLMWFGNLNDIKALNPNSLEDIYLRMAATELGIKENKSHKSNVRKKKTIIIICALSSSVLIICLAFIVFRWKIRRKDVTSDQQEEDPQLPLFDMSTISSATNNFSTDSILGKGGFGSVYKGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCVYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARGLLYLHQDSRHRIVHRDLKAANILLDREMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSTKSDVFSFGVLVLEIVSGNRNRGFIHQDHQFNLLGHAWKLFMEDKGYEIIHAPIRDTSNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLTSESTLPLPKMPGFFLEREMVDEGSSSSNNRTCSINDVTNSIVEAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01228 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Aip08g01228 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Aip08g01228 814 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Aip08g01228 814 Gene3D Transferase(Phosphotransferase) domain 1 573 774 - -
Aip08g01228 814 CDD PAN_AP_plant 335 420 - -
Aip08g01228 814 Pfam PAN-like domain 340 404 IPR003609 -
Aip08g01228 814 Gene3D - 18 150 IPR036426 -
Aip08g01228 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Aip08g01228 814 CDD B_lectin 31 153 IPR001480 -
Aip08g01228 814 Gene3D Phosphorylase Kinase; domain 1 460 572 - -
Aip08g01228 814 PANTHER - 12 811 - -
Aip08g01228 814 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Aip08g01228 814 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Aip08g01228 814 Pfam D-mannose binding lectin 73 178 IPR001480 -
Aip08g01228 814 SMART ntp_6 339 419 IPR003609 -
Aip08g01228 814 CDD STKc_IRAK 503 769 - -
Aip08g01228 814 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 811 - -
Aip08g01228 814 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Aip08g01228 814 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01228 814 Gene3D Hepatocyte Growth Factor 338 421 - -
Aip08g01228 814 SMART blect_4 30 153 IPR001480 -
Aip08g01228 814 Pfam Domain of unknown function (DUF3403) 769 814 IPR021820 GO:0004674
Aip08g01228 814 SUPERFAMILY Protein kinase-like (PK-like) 479 783 IPR011009 -
Aip08g01228 814 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01228 814 Pfam Protein tyrosine and serine/threonine kinase 500 768 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01228 Aip-Chr8 18173513 18176733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01228 473 814 Receptor kinase-like Gene Family AT4G11480 52.841 2.40e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01228 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01228 - - ahf:112769704 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01228 08 18173513 18176733 Aip08g01228 08 18173513 18176733 ECH