Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01226 ATGGAAGGCTTTACAATAATGATTCTGTTCTTCTTCTTTCTGATGAACTATATGGTGGTGGCTTCAACTGCAACGGACACTATAGATTCACTGCAATCTATCAGTGATGGTGAGACAATAGTTTCTTCTGATGAAATCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTACGTGGGAATCTGGTTTAACAAAGATCCATCCAAGACAGTAGTTTGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCCTCAGGGATTCTGAAGCTCAACAACACTGGAACTCTAGTCCTTCTTGATCGTAACAATAGTGTTATTTGGTCCTCCAACACAGCAAGATCCGTCATGAATCCAATTGGAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAACAAGTAATAATGGTGCTAGCAAAGAAGATTTTGTATGGCAAAGTTTTGATTATCCATCCGACACGCTCTTGCCTGGACAGAAGTTAGGAACAAATCTAAAAACAGGACAGAATTGGTATCTAACGTCTTGGAACAGCTCGGACGATCCATTTCCAGGTAGATATACTTTAGAATTCGATGTCAATGGATATCCTCAATTAGTCCTTAAAGATGGAGGATCCAAAAGATGGCGTGCCGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGAAAACTCAGGCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAATAATTCAAACCCTCATAAAGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAATCCGGACACATCGAGTTGGACCAACTTGGCGAGGTTACCGGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAATGTGTAGTTGTTTGGATGGATTTGTGCAAGATAATTATAAGGAGGAGCAAGGTTTATCAGATGGTTGTGTAAGGAGAACTTCATTGGATTGTAATGGAGATGGGTTTTTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGTTGTGCTTGAAGAATTGTTCATGTATGGCTTATGCAGCTTTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGTTCTGACTCCATATTCTCTTGAAGATATTTACATAAGGATGGCTGCTACAGAACTAGAAGCTATTCAGAAAAATAAATCTCACAAATCAAACATCCGAAAGAAAAGGACGATCATCATAGTTTGTGTCTTATCTTTTAGTGTTTTAATCATATGCTTGGCCTTCATCGTCTTTAGATGGAAGATACGAAGAAAAGGTAAGCATGTATTGCATTTACATATCACATATGATACTACTTATGCAGGTGTAATGAATGACTATGAGGAAGATCTACAATTGTCTTTGTTTGATATGTCCACAATTTCTTCGGCAACAAATAATTTTTCAGCTGATAACATTTTGGGAAAAGGTGGCTTTGGTTCGGTATATAAGGGTGTATTAAAGGATGGGAAAGAAATAGCAGTTAAGAGACTCTTACAAAATTCAAGTCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCATAGGAATTTAGTGAAGCTCCTAGGATGTTGCATTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGAGCATGTTACTAGATTGGACAAGGCGCTTTGACATTATCAATGGAATTGCTCGAGGTCTTCTTTATCTTCACCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAAGCTGCAAATGTTTTGTTAGACAGTGAAATGAATCCAAAAATATCAGACTTCGGGCTAGCTAGAAGTTTTGGAGGGAACGAAACTAAAGCAAACACTCGGCATGTTGTTGGAACTTATGGATATTTATCACCGGAATACATAATTGATGGAGTTTACTCAATAAAATCTGATGTATTCAGTTTTGGTGTATTGCTGTTAGAAATAGTGAGTGGAAGTAGAAATAGAGGATTCATTCATCAAGATCATCACTTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATGCATCTAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAAAGGCCAAACATGTCATACGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGATTCTTCACAGAAAGAGAAATGGTTGATGAAGGTTCTTCTCCAAGTAATAACAGAACATACTCAATCAATGATGTCACAGACAGCATATTGGAGGCTAGATAG 2496 0.3722 MEGFTIMILFFFFLMNYMVVASTATDTIDSLQSISDGETIVSSDEIFALGFFSPGTSKNRYVGIWFNKDPSKTVVWVANREKPLTDSSGILKLNNTGTLVLLDRNNSVIWSSNTARSVMNPIGKLLNSGNLVVQETSNNGASKEDFVWQSFDYPSDTLLPGQKLGTNLKTGQNWYLTSWNSSDDPFPGRYTLEFDVNGYPQLVLKDGGSKRWRAGSWNGVQFSGTPQVKENSGFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWNPDTSSWTNLARLPADDCDYYETCGAYSSCNVNNYPMCSCLDGFVQDNYKEEQGLSDGCVRRTSLDCNGDGFLKYSGLKLPDTERSWYSRNISIEDCKMLCLKNCSCMAYAALDISEGASGCLMWFGNLNDIKVLTPYSLEDIYIRMAATELEAIQKNKSHKSNIRKKRTIIIVCVLSFSVLIICLAFIVFRWKIRRKGKHVLHLHITYDTTYAGVMNDYEEDLQLSLFDMSTISSATNNFSADNILGKGGFGSVYKGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCIYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARGLLYLHQDSRHRIVHRDLKAANVLLDSEMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSIKSDVFSFGVLLLEIVSGSRNRGFIHQDHHFNLLGHAWKLFMEDKGYEIIYAPIRDASNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLSSESTLPPPKMPGFFTEREMVDEGSSPSNNRTYSINDVTDSILEAR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01226 831 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Aip08g01226 831 SMART blect_4 31 154 IPR001480 -
Aip08g01226 831 Pfam PAN-like domain 340 405 IPR003609 -
Aip08g01226 831 CDD STKc_IRAK 520 785 - -
Aip08g01226 831 SMART serkin_6 514 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01226 831 Gene3D Hepatocyte Growth Factor 338 415 - -
Aip08g01226 831 CDD B_lectin 32 154 IPR001480 -
Aip08g01226 831 PIRSF SRK 2 831 IPR024171 GO:0004674
Aip08g01226 831 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 17 828 - -
Aip08g01226 831 Gene3D - 18 151 IPR036426 -
Aip08g01226 831 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544
Aip08g01226 831 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Aip08g01226 831 ProSiteProfiles Protein kinase domain profile. 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01226 831 Pfam Domain of unknown function (DUF3403) 786 831 IPR021820 GO:0004674
Aip08g01226 831 Gene3D Phosphorylase Kinase; domain 1 482 589 - -
Aip08g01226 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Aip08g01226 831 Pfam D-mannose binding lectin 73 179 IPR001480 -
Aip08g01226 831 PANTHER - 17 828 - -
Aip08g01226 831 SMART ntp_6 340 420 IPR003609 -
Aip08g01226 831 CDD PAN_AP_plant 336 421 - -
Aip08g01226 831 Gene3D Transferase(Phosphotransferase) domain 1 590 791 - -
Aip08g01226 831 SUPERFAMILY Protein kinase-like (PK-like) 493 785 IPR011009 -
Aip08g01226 831 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Aip08g01226 831 Pfam Protein tyrosine and serine/threonine kinase 517 785 IPR001245 GO:0004672|GO:0006468
Aip08g01226 831 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01226 Aip-Chr8 18133138 18136269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01226 439 807 Receptor kinase-like Gene Family AT4G05200 50.270 2.90e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01226 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01226 - - ahf:112769704 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01226 08 18133138 18136269 Aip08g01226 08 18133138 18136269 ECH
Aip03g01975 03 27621909 27682111 Aip08g01226 08 18133138 18136269 PCT