Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01225 ATGATGAACAATCTTCCATTTCTCTTCGTCATTACAGGGATGGTTCTTCATTTTTTCTTTCTTCGTGATGTCTCAAGCGCAACGGATTCAATATCTATGGTTCAGCCTCTTCATGAAGGAAACACATTGGTTTCTAGTAATGGAACCTTTGAAATGGGGTTTTTCAGCCCAGGAAGTTCTTCAAACCATTACTTAGGTATTTGGTACAAGATTCTCCCGTTGAAAACCGTTGTTTGGGTTGCAAATAGATCCAACCCTGTCAAAGACAACACTAGCATACTCCACATAAACAACCAAGGGATTCTTCAACTTGTCAACAAGAACGGAACCGTCTTTTGGTCTACAAACTCCACCACAAAGATGAACCTTTCGAATCCGATTGCTCAGCTCTTAGATTCTGGAAATCTTGTTATTAGAGATGAGAATGACCAAGATTCCAAGAACTACTACGTCTGGCAAAGCTTTGATTATCCTTGTGATACACTCTTACCGGGGATGAAGCTCGGTTGGGATCTTAAAACCGGTCTTGAACGGCGGTTAACTGCTTGGAAGAATTGGGACGATCCCTCGCCGGGGAATCTTTCTTGGGGAATCTCGCTTGAGGGTTTTCCCCAAGGAATATTCTTGAAGGGCTCGAAAGAGTACTACCGTGTCGGTCCATGGATTGGTCTTCGTTTCAGTGGAACACCTGAATTGAAGCCCAATAACCTTTTTAGTTATAAATTCGTGTCGAACGAAAATGAAGTGTATTTTGTGTATAAGTATAATCTTGAAAAAAAGTCCCTTTTACTGAGACTCGTCATGAACGAAACCTTAGGTAACAGACACGGCTACATGTGGAACGATGGATCTTCGGGTTGGACGGAATTTTCTTCCCATTCGCCGAGAGAAGCGTGTGATCTCTATAATCACTGTGGTCCAAATGCGTATTGCAGCATCATAAGTGGCTATTCAACGTGCCAGTGTCTGAAGGGGTTCAAGCAAAAGTCATCACAAAACTGGACTGAAGGATGTTCTTCTTCATTGCTTGATGAGCAATCGAGATGCAACATGGATAATAAGACGGGTAGTCAGAGAGATGATAAGAATGGGTTTTCTAAAGTTGGAGGAATGAAATACCCAGATACTCGGCGTTCTTGGGTGAATGAGAGTATGAAGAATCTTGATGAATGCAGGGATAAATGCAGAGAGAATTGTTCGTGTATGGCTTATGCAAACTCAGATATTAGAGAAGGTGGTAGTGGCTGTTTGATGTGGTTCGGTGTTCTCGACGATATCAAAGAGTTTTCTGATGGCGGTGCTGATATATACATTCGAACGATCATCGATGGGAAGGAAGGGCACAAAAAGAAGAAGGTAGGACTGATAGTCATCGTTAAGAAGAATAATGATGCATATGAAGACTACTTGGATCTTCCTATCTTTGACCTTGCTACAATTGCAAAAGCAACTGAAGACTTTTCCATTAGTAATAAACTTGGAAAAGGTGGATTTGGGACTGTATATAAGGGAACTCTAGTTGATGGACAAAATATTGCTGTGAAGAGACTTTTACAGGGATCTAATTCTGGACAAGGGTTGACAGAATTTATGAATGAAGTTTTATTAATTGCTAAACTTCAACATCGCAATTTAGTGAAGCTTCTTGGTTGTTGCATTCAAGATGGAGAAAAGATGCTTGTCTATGAATACATGCCCAATAAGAGCCTAGACAATTTTATCTTCGGTCACAAGGATGGTAGAGTTATTTTAGATTGGCCTAACCGCTTCAACATTATATGTGGAATTGCTCGAGGATTACTTTATCTTCATCAAGATTCTCGACTAAGGATTATACATAGAGATCTCAAAGCTAGCAATGTATTGCTTGACAAAGAGTTAAATCCTAAAATTTCTGATTTTGGGATGGCGAAATCATTTGGAGGAAATCAAACAGAAGGAAATACAAGTAGGATTGTTGGAACATATGGTTATATGGCTCCTGAATATGCTATTTACGGATTATTCTCAATAAAATCTGATATATTTAGCTTTGGAGTATTAATTTTGGAAATAGTAAGTGGAAGAAAGAATAGAATGATTTCTCGTGAAAATGAAGATGCAAATCTTATTGCACAAGCTTGGATATTATGGAAAGAAAAGAAGGCTCTAGACTTCATTGATTCATGCATGGAGAATTCTTATGTTGAATTAGAAGCATTGCGTTGCATCCACATCGGTCTCCTATGTGTGCAACAAAATCCTGAGGATAGACCAAATATGTCAAATGTGGTTATGATGTTGGGTAGTGAGGTTGCCTTGCCCCAACCTAAGGAGCCTTCTTTCCTCACTGAGACTTCTCTTCTTCAAGCAGTTGATTCTTCGAGCTACCAACAATGTATTTCAACTAATGAAATAAGTGTCACAGTATTGGAAGCCCGATAA 2424 0.3948 MMNNLPFLFVITGMVLHFFFLRDVSSATDSISMVQPLHEGNTLVSSNGTFEMGFFSPGSSSNHYLGIWYKILPLKTVVWVANRSNPVKDNTSILHINNQGILQLVNKNGTVFWSTNSTTKMNLSNPIAQLLDSGNLVIRDENDQDSKNYYVWQSFDYPCDTLLPGMKLGWDLKTGLERRLTAWKNWDDPSPGNLSWGISLEGFPQGIFLKGSKEYYRVGPWIGLRFSGTPELKPNNLFSYKFVSNENEVYFVYKYNLEKKSLLLRLVMNETLGNRHGYMWNDGSSGWTEFSSHSPREACDLYNHCGPNAYCSIISGYSTCQCLKGFKQKSSQNWTEGCSSSLLDEQSRCNMDNKTGSQRDDKNGFSKVGGMKYPDTRRSWVNESMKNLDECRDKCRENCSCMAYANSDIREGGSGCLMWFGVLDDIKEFSDGGADIYIRTIIDGKEGHKKKKVGLIVIVKKNNDAYEDYLDLPIFDLATIAKATEDFSISNKLGKGGFGTVYKGTLVDGQNIAVKRLLQGSNSGQGLTEFMNEVLLIAKLQHRNLVKLLGCCIQDGEKMLVYEYMPNKSLDNFIFGHKDGRVILDWPNRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMAKSFGGNQTEGNTSRIVGTYGYMAPEYAIYGLFSIKSDIFSFGVLILEIVSGRKNRMISRENEDANLIAQAWILWKEKKALDFIDSCMENSYVELEALRCIHIGLLCVQQNPEDRPNMSNVVMMLGSEVALPQPKEPSFLTETSLLQAVDSSSYQQCISTNEISVTVLEAR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01225 807 CDD PAN_AP_plant 357 440 - -
Aip08g01225 807 CDD B_lectin 34 158 IPR001480 -
Aip08g01225 807 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Aip08g01225 807 Gene3D - 22 155 IPR036426 -
Aip08g01225 807 Gene3D Phosphorylase Kinase; domain 1 454 564 - -
Aip08g01225 807 SMART blect_4 34 158 IPR001480 -
Aip08g01225 807 PANTHER - 16 805 - -
Aip08g01225 807 ProSiteProfiles Protein kinase domain profile. 487 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01225 807 Pfam Protein tyrosine and serine/threonine kinase 489 760 IPR001245 GO:0004672|GO:0006468
Aip08g01225 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 189 IPR036426 -
Aip08g01225 807 Pfam S-locus glycoprotein domain 216 329 IPR000858 GO:0048544
Aip08g01225 807 Gene3D Transferase(Phosphotransferase) domain 1 565 770 - -
Aip08g01225 807 ProSiteProfiles PAN/Apple domain profile. 349 441 IPR003609 -
Aip08g01225 807 Pfam PAN-like domain 361 425 IPR003609 -
Aip08g01225 807 SMART serkin_6 487 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01225 807 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 16 805 - -
Aip08g01225 807 SMART ntp_6 360 440 IPR003609 -
Aip08g01225 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Aip08g01225 807 PIRSF SRK 1 462 IPR024171 GO:0004674
Aip08g01225 807 PIRSF SRK 457 807 IPR024171 GO:0004674
Aip08g01225 807 Pfam Domain of unknown function (DUF3403) 764 807 IPR021820 GO:0004674
Aip08g01225 807 Pfam D-mannose binding lectin 76 184 IPR001480 -
Aip08g01225 807 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Aip08g01225 807 CDD STKc_IRAK 493 761 - -
Aip08g01225 807 Gene3D Hepatocyte Growth Factor 357 432 - -
Aip08g01225 807 SUPERFAMILY Protein kinase-like (PK-like) 469 761 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01225 Aip-Chr8 18087072 18090961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01225 447 778 Receptor kinase-like Gene Family AT4G23140 56.012 4.75e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01225 PK_Tyr_Ser-Thr 9.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01225 - - qsu:111987359 885.56