Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g01214 | ATGAACCTGCTTCTCCTCACTCTTCATCTTCTTCTCTTACCCTTCACAACATCACAACAACAGAACCAAAACTACCCTTCTTCTGGGACACAAAGAAACGATACCTACTGTGACTACCCTTCAGTTTGTGGACCAAATGGGAACTGTGACATTAATCAATCACCAGCATGTTTCTGTTTGGATGGTTTCACACCTAAGTCACCGAGTGGTTACAGTTCAATGGATTATACACAGGGCTGTGTTAGAAACAAGGCCTTGAATTGTAGCACTGACGTGTTTGTTACTTATTCTGTGTTCAAGGAACCAAGTGGCGGCTACTCTTTGTTGAACCAAAGATTGGGAGCGGAAGGTTGCAAGGGAAGCTGCAAGAGTAATTGTTCTTGCATGGCTTATTCTGTAACTGGGAGTGCATGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGGTTGGTTAAGGAAGGTGGTCAAGCTCTTTATATCCGAATGTCAGCTTCAGAGGAACACAAATCTGGAGGGGAAAATCACAAGAAGATAGTTGGAATAATAGTAGGAAGCATAGTTGCTACAATTTCTGGAATGATAATGATATTGGCCTGTTGTTACATATTCAGAAAAAGAAGAAAGAAGTTAGAAGATATGAGATTGAGAGCTAGTGAGATTGTTGATCAAATCAATGAATATGAAGAAGGAGATATAGAGCTTCCATTTCTTGACCTATCAAGAATAGTTGAGGCTACTGGTAATTTTGCAATCGGAAACAAGTTAGGGGAAGGTGGTTTTGGACCTGTGTACAAGGGGACATTAGATGATGGTCGTGAAATCGCGGTAAAGAAGCTTTCAAGTAGTTCTGGACAGGGGATAAATGAATTCAAGAATGAAGTACTACTCATAGCCAAACTTCAACACCGAAATCTTGTAAGGCTTCTCGGATGTTGCATCCAAGATGAAGAGAAACTGCTGATATATGAGTACATGCCTAATAAAAGCTTAGACGGCTTTATTTTTGATCAAACACGGAGAAAATTATTGGATTGGCCTAAGCGTTTCAACATCATTTGTGGGATTTCTAGAGGCCTACTTTATCTTCACGAGGATTCTAGGTTGAGGATTATACATAGAGATCTCAAAGCAAGTAACATTTTATTGGACAATAAGATGGATCCAAAGATCTCTGACTTTGGTTTGGCTCGATGTTTTGGAGGAGATCAAAGCAAAGGAAATACAAAGAAAATAGTAGGAACTTTTGGATATATGGCACCAGAATATGCTATTAGTGGACACTTCTCGGTAAAATCTGATGTGTTCAGTTTCGGAATTTTGTTGCTGGAGATAATCACAGGGAGAAAAAATAGAGGGATATATTTTTCAAGTGACAATGTCAATCTATATGGACATGCATGGGATCTATGGAAGCAAGGAAGGTCCTTAGAACTAGTTGATGAATGCCTTAAGGAGTCATGGAATTCGTCGGAAGCGCAGCGCTGCATCCACATTTGCCTGCTATGCGCGCAGCAGCATCCGCAAGATAGGCCGGAGATGTCATCTGTGGTTCTGATGTTAGGAAGTGAAATCGATTTGCCTCAACCAAAGTTTCCTACTTTCATCATTGGTGGAAATTCTGATGGCAAAAGTTCTTCCTCTTGTCAAAATGAAATAAGCATTACTGAGGTGGAACCTCGATAA | 1683 | 0.4023 | MNLLLLTLHLLLLPFTTSQQQNQNYPSSGTQRNDTYCDYPSVCGPNGNCDINQSPACFCLDGFTPKSPSGYSSMDYTQGCVRNKALNCSTDVFVTYSVFKEPSGGYSLLNQRLGAEGCKGSCKSNCSCMAYSVTGSACKLWSGDLFDVRLVKEGGQALYIRMSASEEHKSGGENHKKIVGIIVGSIVATISGMIMILACCYIFRKRRKKLEDMRLRASEIVDQINEYEEGDIELPFLDLSRIVEATGNFAIGNKLGEGGFGPVYKGTLDDGREIAVKKLSSSSGQGINEFKNEVLLIAKLQHRNLVRLLGCCIQDEEKLLIYEYMPNKSLDGFIFDQTRRKLLDWPKRFNIICGISRGLLYLHEDSRLRIIHRDLKASNILLDNKMDPKISDFGLARCFGGDQSKGNTKKIVGTFGYMAPEYAISGHFSVKSDVFSFGILLLEIITGRKNRGIYFSSDNVNLYGHAWDLWKQGRSLELVDECLKESWNSSEAQRCIHICLLCAQQHPQDRPEMSSVVLMLGSEIDLPQPKFPTFIIGGNSDGKSSSSCQNEISITEVEPR | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g01214 | 560 | Gene3D | Phosphorylase Kinase; domain 1 | 210 | 324 | - | - | |
Aip08g01214 | 560 | Coils | Coil | 210 | 230 | - | - | |
Aip08g01214 | 560 | SMART | serkin_6 | 249 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01214 | 560 | SMART | ntp_6 | 88 | 162 | IPR003609 | - | |
Aip08g01214 | 560 | PANTHER | CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN | 24 | 556 | - | - | |
Aip08g01214 | 560 | CDD | STKc_IRAK | 255 | 520 | - | - | |
Aip08g01214 | 560 | ProSiteProfiles | PAN/Apple domain profile. | 88 | 163 | IPR003609 | - | |
Aip08g01214 | 560 | MobiDBLite | consensus disorder prediction | 538 | 560 | - | - | |
Aip08g01214 | 560 | Gene3D | Transferase(Phosphotransferase) domain 1 | 325 | 526 | - | - | |
Aip08g01214 | 560 | Pfam | PAN-like domain | 88 | 148 | IPR003609 | - | |
Aip08g01214 | 560 | Pfam | Protein tyrosine and serine/threonine kinase | 251 | 518 | IPR001245 | GO:0004672|GO:0006468 | |
Aip08g01214 | 560 | ProSiteProfiles | Protein kinase domain profile. | 249 | 531 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01214 | 560 | SUPERFAMILY | Protein kinase-like (PK-like) | 234 | 520 | IPR011009 | - | |
Aip08g01214 | 560 | MobiDBLite | consensus disorder prediction | 538 | 554 | - | - | |
Aip08g01214 | 560 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 24 | 556 | - | - | |
Aip08g01214 | 560 | Pfam | S-locus glycoprotein domain | 28 | 67 | IPR000858 | GO:0048544 | |
Aip08g01214 | 560 | CDD | PAN_AP_plant | 86 | 161 | - | - | |
Aip08g01214 | 560 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 370 | 382 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g01214 | Aip-Chr8 | 17486290 | 17488812 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g01214 | 181 | 536 | Receptor kinase-like Gene Family | AT4G23230 | 54.318 | 9.48e-129 | 388 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aip08g01214 | PK_Tyr_Ser-Thr | 5.5e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g01214 | - | - | adu:107462470 | 776.163 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip08g01214 | 08 | 17486290 | 17488812 | Aip08g01214 | 08 | 17486290 | 17488812 | ECH |