Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01213 ATGGTGCAGGGGCTTCAAGCAGCACCAGCAAATGAGTTCGCTCACGACGAGGACATGATCATACAGGTTCACCGGAAAGAGGAAGGAGACAAGGAAGANNCTAGACGCGGGTCGCTGACCCGCAGAGTTGAAGAGGAGCGCAACCATCAAAACAACGATGATGCTCGTCTCGGTGATGAGGACGCTGCGCCTGATGGGACTGGCCGGGTGGAAGCTCGCCGATATGCAGATGAAGGAAGCCGACGCCGCCAGGACGGCGAACCACACACGCGAACTCGCGAAAGTGGTCTTGTTGGGGCTGCTGGGAATGTCTCTGCCTCAGCGTTTATTGGTGGGACGGGGAGTCTTGGAGGGGGCTCATCAGCTGCGGTGGACGGCGCGACGGGACCGATGCGGGCGGGGCAATTTCAGACCGTCGATTTCAAAAGCGTGGGTGCGGCGGGAGAGGATATGAGGGCTAGTCATAGCCCCAAAGGTATGAAAGCGGATTCGACCGTGGCTGAGACACCGCATGCCTGTCCGGTTGTGAGCCTGGACAGTGGAGGCCTGATTCATTCTCAAGGTGCTATGGGGAAGGATTCCAGGCAGGATGAGGAGCGCTATGGAGGGAATGAGTCTGGGGATGAGGAAGCAACTGATACCATAACTCAGTCACAGTCTCTCACTGAAAACCAAACATTGGTTTCCAAGAATGAAAACTTCCAATTGGGTTTCTTCACTCTTCCCCAAAACTCTAGCAACCGTTATCTTGGGATTTGGTACAACAAGATACCGGTTCAAACCGTTGTATGGCTCGCAAACCGAGAAAAACCAGTCACAAAAGAAATACCTGCAGTCTTGATGATAAACAAAACACAGAATAATAATGACACACTTATCCTCCATCAGAATTACTCTGTTCTATGGTCTATAACTCCTTCTAGAAGAGCTCGAAATATGGTTCTTCAGCTATTGGATTCTGGAAACCTTGTTCTGAGAGAAAAAAATGATGAAAATGAAGAGAATTATCTATGGCAGAGTTTTGATTACCCTTGTGATACACTCTTGCCAGGGATGAAGCTTGGCAAGGATTTAAGGACTGAGTTCGATAGGCGAGTAACCGCGTGGAAGAACGAGTATGATCCTTCAATTGGAAATTTGTCTTGGGGAATGGATGTTACCAATTGGCCTCAACAGATGCAGAGAGTAGGATCAATGAAGCAGTACAACAGAGGTTCTTGGAATGGAATTGACTACACTGGCAGACCTACCATAAGGCCTAGTCCGGTTTTCGAGTTCAAGTACTTTGCCGATGACGAACAAGTCTACTTCATGTTTAGCCTTGTGAATAGCTCTGTCAAAGCTAGGATGGTTCTGAACCAGAGCAGTTATAAGCTCCTGCATTTGGCGTGGGACGAGGCGGCACGAGAGTGGAATGTTTATGGCTTGTTACCAAGAGATTTTTGTGATGATTATGGTGCTTGTGGTCCTAATGGTAATTGTGATGTTAGCAAGTTACCATATGCTTGTGATTGTTTGAGAGGGTTTAGGCCTAAGTCATCAAGAGATTGGAAGGCAATGAACTACCAAGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAAGCGATGGATTTATTAAGTATGGGAAGATGAAAGTGCCTGATACTGAGAATTGTTGGTACTTGAATCAGAGCAAGAACTTGGAGGAGTGCAGAGATACATGCTTGAGGAATTGTTCTTGTATGGCTTATACGAATTCGGATATTCGAGGAGAAGGCAATGGCTGTGCTTTGTGGTTTGGTGATCTTAATGACTTGAGGGTTCAACCAAATGCAGGGCAAGACCTATATGTTAGAGTGCCAGCTTCAGAATTAGATACAAACAATGGAGACAGGATGAAGATAGGATTTGCAGTTGGGGGCACTATTACAATATTAAGTGGATTACTGTTAGTTCTTTATTTCATATTCATAAGAGGAAGGAGTGCAACAATGAAAAAGTGCGCATCAGTAGCAGATCATTTAAAGGAAGAACAGGAAGAGGATTTGGAGCTTCCTTTGTTTGACCTATCTAGTATAGTTAGTGCTACTGACAACTTTTCAATCAACAATAAGCTTGGAGAAGGAGGTTTTGGACCAGTATACAAGGGTATACTAGATGATGGGCGACAAATTGCTGTGAAGAGGCTTTCAAGTAGTTCTGGTCAAGGCCTACATGAGTTCAAAACAGAAGTAAAACTAATAGCTAAACTTCAACACCGTAATCTTGTAAAGCTTTTTGGATGTTGCATCCAAGAAAAGGAGAAACTACTCATTTACGAATACATGCCTAACAGAAGTTTGGACTATTTTATTTTTGATCAAACACAAAGAACAGTATTGGATTGGCCAAGACGATTTCATATAATTTGTGGCATTGCAAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACTTAGAATAATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTAGACGATGAGATGAATCCTAAAATATCAGACTTTGGATTAGCTAGAATTTTGGGAGGAGACCAAACTGCAGATTCTACACGTCGGGTGGTTGGAACTTATGGATACATAGCACCAGAATACGCGATAGATGGAAACTTCTCAATAAAATCAGACGTATTTAGCTTTGGTGTTTTGCTGTTGGAGATAATATCAGGAAGGAAAAACAGAGGAGAACACAATCAAAAAGAAAGTACAAGCCTTATTGGACATGCGTGGGATTTATGGAAGCAAGGAAGGTCACTGGAGTTGGTGGATGAATGCCTCAAAGATTCATGGAATTTGAGTGAAGTACAACGTTGTATTCACATTGGCCTCCTATGTGCACAGCAATATCCACATGATAGGCCAACAATGTCTTCTGTGGTTTTAATGTTGGGAAGCGAAGTTGATTTGCCTCAACCCAAAGCTCCTACATTTATCTTTTGTGAACCTTTTGATGGTTCCAGTTCCAGTACTTGTAAAAACGAATTAAGCATTACAGAGATGGAAGCTCGGTAA 3018 0.4384 MVQGLQAAPANEFAHDEDMIIQVHRKEEGDKEXXRRGSLTRRVEEERNHQNNDDARLGDEDAAPDGTGRVEARRYADEGSRRRQDGEPHTRTRESGLVGAAGNVSASAFIGGTGSLGGGSSAAVDGATGPMRAGQFQTVDFKSVGAAGEDMRASHSPKGMKADSTVAETPHACPVVSLDSGGLIHSQGAMGKDSRQDEERYGGNESGDEEATDTITQSQSLTENQTLVSKNENFQLGFFTLPQNSSNRYLGIWYNKIPVQTVVWLANREKPVTKEIPAVLMINKTQNNNDTLILHQNYSVLWSITPSRRARNMVLQLLDSGNLVLREKNDENEENYLWQSFDYPCDTLLPGMKLGKDLRTEFDRRVTAWKNEYDPSIGNLSWGMDVTNWPQQMQRVGSMKQYNRGSWNGIDYTGRPTIRPSPVFEFKYFADDEQVYFMFSLVNSSVKARMVLNQSSYKLLHLAWDEAAREWNVYGLLPRDFCDDYGACGPNGNCDVSKLPYACDCLRGFRPKSSRDWKAMNYQGGCLRDKPLNCESDGFIKYGKMKVPDTENCWYLNQSKNLEECRDTCLRNCSCMAYTNSDIRGEGNGCALWFGDLNDLRVQPNAGQDLYVRVPASELDTNNGDRMKIGFAVGGTITILSGLLLVLYFIFIRGRSATMKKCASVADHLKEEQEEDLELPLFDLSSIVSATDNFSINNKLGEGGFGPVYKGILDDGRQIAVKRLSSSSGQGLHEFKTEVKLIAKLQHRNLVKLFGCCIQEKEKLLIYEYMPNRSLDYFIFDQTQRTVLDWPRRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTADSTRRVVGTYGYIAPEYAIDGNFSIKSDVFSFGVLLLEIISGRKNRGEHNQKESTSLIGHAWDLWKQGRSLELVDECLKDSWNLSEVQRCIHIGLLCAQQYPHDRPTMSSVVLMLGSEVDLPQPKAPTFIFCEPFDGSSSSTCKNELSITEMEAR 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01213 1005 Gene3D Phosphorylase Kinase; domain 1 655 769 - -
Aip08g01213 1005 SUPERFAMILY Protein kinase-like (PK-like) 677 977 IPR011009 -
Aip08g01213 1005 CDD STKc_IRAK 700 965 - -
Aip08g01213 1005 SMART ntp_6 534 614 IPR003609 -
Aip08g01213 1005 SUPERFAMILY alpha-D-mannose-specific plant lectins 262 375 IPR036426 -
Aip08g01213 1005 CDD PAN_AP_plant 531 615 - -
Aip08g01213 1005 ProSiteProfiles Bulb-type lectin domain profile. 212 338 IPR001480 -
Aip08g01213 1005 CDD B_lectin 218 344 IPR001480 -
Aip08g01213 1005 Pfam S-locus glycoprotein domain 402 513 IPR000858 GO:0048544
Aip08g01213 1005 ProSiteProfiles Protein kinase domain profile. 694 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01213 1005 Gene3D - 208 341 IPR036426 -
Aip08g01213 1005 SMART serkin_6 694 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01213 1005 MobiDBLite consensus disorder prediction 16 99 - -
Aip08g01213 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Aip08g01213 1005 MobiDBLite consensus disorder prediction 191 207 - -
Aip08g01213 1005 MobiDBLite consensus disorder prediction 209 226 - -
Aip08g01213 1005 PANTHER - 213 990 - -
Aip08g01213 1005 MobiDBLite consensus disorder prediction 17 92 - -
Aip08g01213 1005 Pfam D-mannose binding lectin 261 370 IPR001480 -
Aip08g01213 1005 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 213 990 - -
Aip08g01213 1005 ProSiteProfiles PAN/Apple domain profile. 534 615 IPR003609 -
Aip08g01213 1005 SMART blect_4 218 344 IPR001480 -
Aip08g01213 1005 MobiDBLite consensus disorder prediction 171 226 - -
Aip08g01213 1005 Gene3D Transferase(Phosphotransferase) domain 1 770 972 - -
Aip08g01213 1005 Pfam Protein tyrosine and serine/threonine kinase 695 940 IPR001245 GO:0004672|GO:0006468
Aip08g01213 1005 Pfam PAN-like domain 534 600 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01213 Aip-Chr8 17439649 17483838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01213 682 981 Receptor kinase-like Gene Family AT3G45860 59.868 3.25e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01213 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01213 - - adu:107462330 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01213 08 17439649 17483838 Aip08g01213 08 17439649 17483838 ECH