Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01212 ATGGGAAACTTCATTATTACTATTATACCAATTATCAGTTTCTACCTTCTTCTCTTTCAAATCTTCCAAACAATTGCAGAAACTGATACCATCACTCACTTCCAGTCTCTAAGTAAAAACCAGACCTTAGTTTCCAAGACCGGACAATTTGAGCTTGGTTTCTTCACTCTTGATAATTCCACCAACCGTTATTACCTTGGCATATGGTACAAAAATATCCCAGGTCAAACCATTGTATGGGTCGCAAACCGCGAAAAACCCGCCACCAAACCCAACTCTCTTCTATTGATCATAAACAACACAACAGAGAACACACTACTCCTTAGTCAAGACAACAATACTGTTCTATGGTCTGTGAGCGTATCAACAAAACCCAAGAATCCAATCCTGCAGCTCTTGGATTCAGGGAACCTTGTTCTGACGGAAGAAAAGAATTATCTATGGCAAAGCTTTGATTACCCTGGTGATACACTCTTGCCAGGGATGAAGCTTGGTAAGGATTTGAAGACTGGTTTGGATAGGCGCGTAACTGCGTGGAAGAATAACAAAGATCCTTCGCCAGGAACGTTAAATTGGGGAATGGATGTGACTAAGTGGCCAGAACCAATGCAGAGAATAGGATCAATGAAACAGTTCAACTCTGGACCGTGGATTGGAGTGGGTTATGGTAGCAAACCAACCATAAAGCGCCAAGCATTTTTCAGCTTAGTTTTTGTCTCCAATGAGGATGAAGTCTACTTCGCATTCCACCTTGATAACAACTCAGTTCCCGTGAGGATGGTGTTGGATCAAGCCACCTACAAGCGTCTGTATTTTGTTTGGATTGATTCTGACCAACAATGGCAGGTCTATGTTTCCCTGCCAAGAGACTCTTGCGAGCGATATAGTGTTTGTGGTCCTAATTCCAATTGTGATTGGAACACGTCCGCAGTTGATGCTTGTGCTTGTTTGAGAGGGTTCAGGCCTAACAGCGCAGGAGGTTGCTTGCGCGACAAGCTGCTACAATGTGAAAGTGATGAGTTTGTTAAGTATGAGAAGATGAAAGTGCCGGACACTGAGAATTGTTGGTACTTGAATCAGAGCATGAACCTTGTTGACTGCAGAGACAAATGCTTGAGGAATTGTTCCTGTGTTGCTTATGCGAATTCGGATATTAGAGGTGAAGGTAGTGGTTGTGCTTTGTGGTTTGGTGATCTTAATGACTTGAGGATTCTACCAGATGCAGGCCAAGATCTTTATATTAGAGTTCCTGCTTCAGAGTTAGAGACAAACAACGGACGCAAGGTCAAAATAGGAGTTGCAGTTGGAGTCACAATTGGCGTATTATGTGGCCTTCTCTTAGTTTTGTGTTTGATATGGAAAAGAAGGAAAAGGGCCATTCTGAAAGAGGCTATTGTAGCATTCGTGGATCATTCCGAGGAAGACACAGAGGTTCAATTCTATGACCTATCAGTTATAGCTTCTTCCACAGATAACTTTTCTGATAAAAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTCTTCATGGGAACATTGGAAAATGGACAAAGAATAGCAGTTAAGAGGCTTTCAACTGGTTCTGGACAAGGGGCCGAGGAATTTAAGAATGAAATTGCATTGATTGCTAAACTTCAGCATCGTAATCTTGTCAAACTAAAAGGATATTGCATTCAGAATGAAGAGAAATTACTTATATATGAATACATGCCTAATAAGAGTTTGGATTTCTTTATATTTGATCAAACACAAAGAATGCTTTTGGATTGGCCTACAAGATTCGATATAATATGTGGGATAGCGAGAGGCCTTCTTTATCTTCACCAAGATTCAAGACTTAGAATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGACGATAAGATGAATCCAAAGATCTCAGATTTCGGTTTAGCTAGAATCTTGGGAGAAGACAAGACTGCAGAAATTACGCATCGCATTGTTGGAACATATGGATATATAGCACCGGAATATGCAATTGATGGAAACTGCTCAGTAAAATCAGACGTTTATAGCTTCGGTGTTCTCTTGTTGGAGATAGTATCAGGAAAGAAAAACACAGGAGGCCATGAAAAAGAAAATACAAACCTTACTGGATACGCATGGAATTTGTGGATGGAAGGGAGGCCTTTAGACTTGATTAGTGAAGACCTAAAAGAATCTTGCAATGGCTCTGAAGCATTGCGATGCATTCAAATTAGTTTTCTGTGTCTCCAACAGAATCCACATGAGAGACCAAGCATGTCATCTGTGGTTATGATGTTAGGTAGTGAAATTTGCTTGCCTCAGCCAAAACAACCAGCTCTTTTTGTTCGAGAATATTCTTCACCAAATAAGAGTAATTTATTTTCTACTAATGAATTAAGTATGTCCATTTTAGAACCACGTTAG 2415 0.4029 MGNFIITIIPIISFYLLLFQIFQTIAETDTITHFQSLSKNQTLVSKTGQFELGFFTLDNSTNRYYLGIWYKNIPGQTIVWVANREKPATKPNSLLLIINNTTENTLLLSQDNNTVLWSVSVSTKPKNPILQLLDSGNLVLTEEKNYLWQSFDYPGDTLLPGMKLGKDLKTGLDRRVTAWKNNKDPSPGTLNWGMDVTKWPEPMQRIGSMKQFNSGPWIGVGYGSKPTIKRQAFFSLVFVSNEDEVYFAFHLDNNSVPVRMVLDQATYKRLYFVWIDSDQQWQVYVSLPRDSCERYSVCGPNSNCDWNTSAVDACACLRGFRPNSAGGCLRDKLLQCESDEFVKYEKMKVPDTENCWYLNQSMNLVDCRDKCLRNCSCVAYANSDIRGEGSGCALWFGDLNDLRILPDAGQDLYIRVPASELETNNGRKVKIGVAVGVTIGVLCGLLLVLCLIWKRRKRAILKEAIVAFVDHSEEDTEVQFYDLSVIASSTDNFSDKNKLGEGGFGPVFMGTLENGQRIAVKRLSTGSGQGAEEFKNEIALIAKLQHRNLVKLKGYCIQNEEKLLIYEYMPNKSLDFFIFDQTQRMLLDWPTRFDIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKMNPKISDFGLARILGEDKTAEITHRIVGTYGYIAPEYAIDGNCSVKSDVYSFGVLLLEIVSGKKNTGGHEKENTNLTGYAWNLWMEGRPLDLISEDLKESCNGSEALRCIQISFLCLQQNPHERPSMSSVVMMLGSEICLPQPKQPALFVREYSSPNKSNLFSTNELSMSILEPR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01212 804 CDD STKc_IRAK 499 763 - -
Aip08g01212 804 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Aip08g01212 804 Gene3D Transferase(Phosphotransferase) domain 1 569 769 - -
Aip08g01212 804 PANTHER - 29 801 - -
Aip08g01212 804 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Aip08g01212 804 SMART ntp_6 336 416 IPR003609 -
Aip08g01212 804 PIRSF SRK 2 804 IPR024171 GO:0004674
Aip08g01212 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Aip08g01212 804 Gene3D - 23 151 IPR036426 -
Aip08g01212 804 Pfam PAN-like domain 336 402 IPR003609 -
Aip08g01212 804 CDD PAN_AP_plant 334 417 - -
Aip08g01212 804 Gene3D Phosphorylase Kinase; domain 1 467 568 - -
Aip08g01212 804 CDD B_lectin 35 154 IPR001480 -
Aip08g01212 804 Pfam Protein tyrosine and serine/threonine kinase 496 762 IPR001245 GO:0004672|GO:0006468
Aip08g01212 804 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Aip08g01212 804 ProSiteProfiles Protein kinase domain profile. 493 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01212 804 Pfam D-mannose binding lectin 77 180 IPR001480 -
Aip08g01212 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
Aip08g01212 804 SMART blect_4 34 154 IPR001480 -
Aip08g01212 804 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 801 - -
Aip08g01212 804 SUPERFAMILY Protein kinase-like (PK-like) 475 794 IPR011009 -
Aip08g01212 804 SMART serkin_6 493 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01212 Aip-Chr8 17435177 17438236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01212 414 804 Receptor kinase-like Gene Family AT4G05200 47.794 1.25e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01212 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01212 - - ahf:112769120 1150.96