Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01210 ATGAAAGTACCAGACACTGAAAATTGTTGGTACTTGAATCAGAGCATGAACCTTGTTGACTGCAGAGACAAATGCTTGAGAAATTGTTCTTGTGTTGCTTATGCAAATTCGGATATTAGAGGTGAAGGGAGTGGTTGTGCTTTGTGGTTTGGTGATCTTAATGACTTGAGGATTCTACCAGATGCAGGCCAAGATCTTTATATTAGAGTTCCTGCTTCAGAGTTAGAGACAAAAAATGGATGCAAGGGCAAGATACGAATTGCAGTTGGGGTCACAATTGGCGTATTATATGGCATGTTCTTCGTTTCATGTTTGATATGGAATGGACGAAAAAAGGCCACTCTAAAAGATAATTTAGAGACCAATGCAGAATTAATGGATCATATCAAGGAAAAACAAGAGGAAGATCCAGAGCTTCTATTGTATGACCTATCAGTTATAGCTTTTTGCACTGATAACTTTTCAGACAAAAACAAGCTTGGAGAAGGTGGTTTTGGATCTGTGTTTAAGGGTACATTGGAAAATGGACAAAGAATAGCAGTTAAGAGGCTCTTGACCGGTTATGGACAAGGGATCAAAGAATTTAAGAATGAAATTACATCAATTGCCAAACTTCAGCATCGTAATTGCATCAAACTGCAAGGATATTGCATTCAGAATGAAGAGAAAGAGCAAGGGGAGGCCGTGGAGGCTAGTGGTCGGGTAGGTGGGCCCGACCCGGCTCATCAAGAAAATGTTGTTTCTTCCGAGAAGCTTGAGGAGGCTGCTGGCGTGGAGACGGAGATGTTTGAGGATGATTTTGGTGATGATGAGCTGGGGGCTGTAGGTAACCCTAAGAAGAGGAAGAGGGATACTGTCAAGGCCCTCTCGGTCATGGAGAAGAACTTTGATGCTGGGGGATTTATCGAGTCCCAGCTGCTTCCCGGTACCGAGGCGTATTTCCATGAAGCCGATCTCTCCAGTCAGGCTAGGTGGATTTATCGCAGCCTTCTTCGTGCTGCTGCCATCGCCAAGAAAGTGGAGCCTATCTTGGGCAACTATCATGCCATGGAGGTGAGGCTTCAGAACTCCCAAAAAGATTTGACGAACTCACGATCTCGGGAGGAGTCTCTGAAGACTAAGTTGGCTGATCGTGAGAAGAGGGCTGAGGAGGATGCCAGGGAGATTAATAGGCTGGTAGATCGGGATATGGCTTTAATGAAAGACCTGAATGCCTCCCGCGGTGAGACTGCGGCCATGAAGAAGATGGTTGAGGAGTTGGAGAGAAGCTGA 1272 0.4513 MKVPDTENCWYLNQSMNLVDCRDKCLRNCSCVAYANSDIRGEGSGCALWFGDLNDLRILPDAGQDLYIRVPASELETKNGCKGKIRIAVGVTIGVLYGMFFVSCLIWNGRKKATLKDNLETNAELMDHIKEKQEEDPELLLYDLSVIAFCTDNFSDKNKLGEGGFGSVFKGTLENGQRIAVKRLLTGYGQGIKEFKNEITSIAKLQHRNCIKLQGYCIQNEEKEQGEAVEASGRVGGPDPAHQENVVSSEKLEEAAGVETEMFEDDFGDDELGAVGNPKKRKRDTVKALSVMEKNFDAGGFIESQLLPGTEAYFHEADLSSQARWIYRSLLRAAAIAKKVEPILGNYHAMEVRLQNSQKDLTNSRSREESLKTKLADREKRAEEDAREINRLVDRDMALMKDLNASRGETAAMKKMVEELERS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01210 423 PANTHER - 1 223 - -
Aip08g01210 423 Pfam PAN-like domain 1 56 IPR003609 -
Aip08g01210 423 SMART ntp_6 1 70 IPR003609 -
Aip08g01210 423 MobiDBLite consensus disorder prediction 358 384 - -
Aip08g01210 423 ProSiteProfiles PAN/Apple domain profile. 1 71 IPR003609 -
Aip08g01210 423 SUPERFAMILY Protein kinase-like (PK-like) 137 222 IPR011009 -
Aip08g01210 423 MobiDBLite consensus disorder prediction 228 249 - -
Aip08g01210 423 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 223 - -
Aip08g01210 423 CDD PAN_AP_plant 1 71 - -
Aip08g01210 423 Gene3D Phosphorylase Kinase; domain 1 114 224 - -
Aip08g01210 423 Coils Coil 372 392 - -
Aip08g01210 423 Pfam Protein tyrosine and serine/threonine kinase 157 221 IPR001245 GO:0004672|GO:0006468
Aip08g01210 423 Coils Coil 115 136 - -
Aip08g01210 423 ProSiteProfiles Protein kinase domain profile. 154 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01210 423 MobiDBLite consensus disorder prediction 362 384 - -
Aip08g01210 423 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01210 Aip-Chr8 17286798 17295245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01210 2 223 Receptor kinase-like Gene Family AT4G04570 34.034 1.18e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01210 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01210 - - aip:107610635 453.751