Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01209 ATGATGGAAGTGGTTCTGAGTTTGATGCTAATTAGCAGTGCTCATTTTCTATTAACTGAAGAGAGCCAAAACGACAGCGTATCATCCTCTTCTGGAGGGAACGAAAGCTACTGCGACTTCCCTGGAATTTGCGGACCCAATGGGAACTGCGATGTTAATAAGCCGCTAGCTTGTGGATGCTTGGATGGTTTCACACCCAAGTCTCCCACTGCCTTCGATAGCCTCGACTACACGCACGGCTGCGTCAGAAAGAAACCACTCAATTGTAGCACCGACGTGTTCGTTGCCTATGCTGTGTTCCAAGAACCCACTGGCACGTCTTATTATCATTCTTTCTTCAACCAAAGTTCGGAAGCCGAGGGTTGCAAGGAGAAATGCAAGAGTAATTGTTCTTGCATGGCGGCTTATACAGAAATTGGGAGTGGTGAATGCAAATTGTGGAGTGGTGATCTGTTTGATGTTAGGGTCATACAGGAAGGACGCCAATATCTTTATATACGAATGCCTGCTTTAGACCATGCAGAGCCCGGAGGCCGAAGTCACCGGCGCAGCGACCATAAGGTGGTGGGAGTAGTTGTTGGCAGCGCCGCTGTTGTGATTTTGGGTATGATCTTGGCTTCTTGGTACATGCTCTCCAAAAGAACAGACCCACAAGCATTGGGAGATGTAAGGATTGGTGAGATGCTTAGTCATGCCAATGAACAAGAAGGGGATCTGGAGCTTCCATTACTTGACCTATCAAGAATAGCTATGGCTACTGATAACTTTTCTCTCAATAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGCGTATTAGATGATGGACAACAAATTGCTGTAAAGAGACTTTCAAGTAGTTCTGGACAGGGTTTAAATGAATTTAAAACTGAGGTCAAACTAATAGCCAAACTTCGACACCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCATGAGGAAGAGAAATTGTTGGTATATGAATACATGCCTAACAGAAGTTTAGACTATTTTATTTTTGATCAAATGCGAAAGAAGACTTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGAATTGCTAGGGGCTTATTATATCTTCATCAAGATTCAAGACTAAGGATTATACATAGAGATCTTAAAGTAAGTAATGTTCTATTAGATAGTAAAATGAATCCAAAGATTTCAGATTTCGGTTTAGCTAGAAGTTTTGGAGGAGATCAAAGTAAAGGAAATACACATAGAGTAGTGGGAACTGTTGGATACATGGCACCTGAATATGCTGTTCATGGAAATTTTTCGGTAAAATCTGATGTCTTTAGTTTCGGTATTTTGCTACTCGAGATAATATCAGGAAGAAAAAATAGAAGATTTTATTATCCAAGTTCCAATGCCAACCTATATGGACATGCATGGGATCTATGGAAACAAGGAAGGTCATTAGAATTGGTGGATGAATGGTTGAAGGAGACATGGAATGTGTCTGAAGTGCAACGTTGCATCCACATTAGCCTCCTATGTGCACAACAGCATCCCCAAGATAGGCCAACCATGTCATCAGTGGTTCTCATGCTTGGAACTGAAATTGATTTACCTCAACCCAAATATCCTACGTTTTTTGTTGCTGAATCTTCTGAAGGCACAAGTTCCTCCTCTTGTAAAAACGAATTGAGCGTTACAGAATTGGAACCTCGATAA 1704 0.4161 MMEVVLSLMLISSAHFLLTEESQNDSVSSSSGGNESYCDFPGICGPNGNCDVNKPLACGCLDGFTPKSPTAFDSLDYTHGCVRKKPLNCSTDVFVAYAVFQEPTGTSYYHSFFNQSSEAEGCKEKCKSNCSCMAAYTEIGSGECKLWSGDLFDVRVIQEGRQYLYIRMPALDHAEPGGRSHRRSDHKVVGVVVGSAAVVILGMILASWYMLSKRTDPQALGDVRIGEMLSHANEQEGDLELPLLDLSRIAMATDNFSLNNKLGEGGFGPVYKGVLDDGQQIAVKRLSSSSGQGLNEFKTEVKLIAKLRHRNLVKLLGCCIHEEEKLLVYEYMPNRSLDYFIFDQMRKKTLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKVSNVLLDSKMNPKISDFGLARSFGGDQSKGNTHRVVGTVGYMAPEYAVHGNFSVKSDVFSFGILLLEIISGRKNRRFYYPSSNANLYGHAWDLWKQGRSLELVDEWLKETWNVSEVQRCIHISLLCAQQHPQDRPTMSSVVLMLGTEIDLPQPKYPTFFVAESSEGTSSSSCKNELSVTELEPR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01209 567 Pfam S-locus glycoprotein domain 34 68 IPR000858 GO:0048544
Aip08g01209 567 Gene3D Transferase(Phosphotransferase) domain 1 332 534 - -
Aip08g01209 567 MobiDBLite consensus disorder prediction 547 567 - -
Aip08g01209 567 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 4 560 - -
Aip08g01209 567 Pfam PAN-like domain 89 154 IPR003609 -
Aip08g01209 567 ProSiteProfiles PAN/Apple domain profile. 89 170 IPR003609 -
Aip08g01209 567 Gene3D Phosphorylase Kinase; domain 1 224 331 - -
Aip08g01209 567 Pfam Protein tyrosine and serine/threonine kinase 257 525 IPR001245 GO:0004672|GO:0006468
Aip08g01209 567 CDD STKc_IRAK 262 527 - -
Aip08g01209 567 SMART ntp_6 89 168 IPR003609 -
Aip08g01209 567 ProSiteProfiles Protein kinase domain profile. 256 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01209 567 SMART serkin_6 256 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01209 567 CDD PAN_AP_plant 86 169 - -
Aip08g01209 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Aip08g01209 567 SUPERFAMILY Protein kinase-like (PK-like) 241 546 IPR011009 -
Aip08g01209 567 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01209 Aip-Chr8 17209864 17212963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01209 184 543 Receptor kinase-like Gene Family AT4G23230 53.022 1.29e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01209 PK_Tyr_Ser-Thr 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01209 - - adu:107462470 1097.42