Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01206 ATGGAGAACAGAAACTTTGCCATTATAATAGCAATGATCATGTTCTTAGTCTCCAACACCATTTCAGCAACTGATACCATAACTCACTTACATCCTCTAACTGAAAATCAAACCTTGGTTTCCAAGAACGGAGAATTCGAGCTTGGCTTCTTTTCTCCCCGCAACTCTGATAACCGCTACCTTGGCATTTGGTACAAGAAGATCGCCATTCAAACCATTGTATGGGTAGCAAACAGAGAAGAACCTGTCGCAACACACATCTCTGCATTGCTGACAATAAACATCACCCAGAATAGCAGCGCACTACTTGTCCTCCATCAGAATAACTCAGTTCTATGGTCCGTGAGCGTATCAAGAAAACCCAAGAATCCAATTTTACAGCTATTGGATTCAGGGAACCTTGTTCTGAGAGAAGAAAATGATGAGAATGAAGAGAAGAACTATCTATGGCAAAGCTTTGATTACCCTGGTGATACACTCTTGCCAGAGATGAAGCTTGGTAAGGATTTGAAGACCGGGCTCGATCGACGCTTATCGGCGTGGAAGAATGAAAGTGATCCTTCACCGGGAAGCTTCACATGGGAAATGGATGTCACCAACTGGCCAGAACCAATGCAGAGAATCGGTTCCAAGAAACAGTTCAACAGTGGTCCATGGACAGGACTTGATTATAGTGGTAAACCAACGAGGAAGCCCAGCATGGTTTTCAACTTCACATACTTCTCTGACCAGAATGAAGTGTACTTCATGTTCCACCTTGTGAATACCTCGGTCAAAGCTAGGATGGTCATGAACCAGAGCACCTTGAAGCGTGTTCATACTGCTTGGGATCAGAATGAGCAACAGTGGAAGGTGTATGCTCTTCTGCCCAGAGATTTCTGCGATGAATACGGTTCTTGCGGCCCCAATGGGAATTGTGATGGTAACAAGGTTCCAGCTTGCCAATGTTTGAGAGGATTTAAGCCCAAGTCACCCCGTCAATGGAATGGTGGGAAGTACGATGAAGGTTGTGTGCGTGACACACCACTGGATTGCAAAAGTGATGGATTTGTTAAGTATGTTAAGATGAAAGTGCCTGATACAGAACATAGTTGGTTGAACCAGAGCATGAATCTTGTTGAGTGCAGAGAGAAATGCTTCAGAAACTGTTCTTGTATGGCTTATTCAAACTCAGACACCAGAGGATCAGGGTCAGGGAGTGGTTGTGCTATGTGGTTTGGTGATCTTAATGACTTGAGGGTTCACCTAGCTGATGCAGAACACGATCTGTATGTCAGAGTTCCTGCTTCGGTGTTAGAGACGAACAACGGAAGCAAGGTCAAGATTGGTGTTGCGATTGGAGGCACTGCTACCATATTATGTGTACTTCTCTTAGTTCTTTATTTCATATACATAAGACGAAGTGGCACGATGAAAAATAATGCAGCAGTAGTAGATCATTTCAAGGAAGAACAGGAAGAGGATTTGGAGCTTCCATTGTTTGACCTATCAGTTATAGCTAGCGCCACAAACAACTTTTCAATCGACAACAAGCTCGGAGAAGGTGGTTTTGGACCTGTATATAAGGGGACAATGGAAAATGGACAAGAAATTGCTGTTAAGAGACTTTCTAGAAGCTCTGGCCAAGGACTTAAAGAATTTAAGAATGAAATTGTCTTAATAGCCAAACTTCAGCATCGTAATCTTGTAAAGCTTCATGGGTGTTGCATTCATGAGGAAGAAAAATTGCTCGTCTATGAGTACATGCCTAATAAAAGTCTGGATTTATTTATATTTGATGAAACGCAAAGAATGCTCTTGGATTGGTCGAAGCGCTTTCAAATAATTTGTGGAATTGCAAGGGGAATTCTTTATCTTCATCAAGATTCAATACTAAAAATCATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAGTGATATGAATCCTAAAATATCAGACTTTGGTTTGGCCAAAATTTTTAAAGGAGATCAAAGTGCAGAAACTACAGGTCGAGTGGTTGGAACCTATGGATACATGGCACCAGAATATGCAATAGACGGAAATTTTTCAGTGAAATCTGATGTCTTTAGCTTTGGCATTTTGCTGCTGGAGATAGTATCCGGAAAGAAGAACAAAGCAAACCATCATGATAAAGAAAGTACATACCTTGTTGGATATGTAAGTATAGATCAGCTATCATTTGATCATGTCTATCCAAACTTATACTTCACAATGAATGCTACATAA 2235 0.4112 MENRNFAIIIAMIMFLVSNTISATDTITHLHPLTENQTLVSKNGEFELGFFSPRNSDNRYLGIWYKKIAIQTIVWVANREEPVATHISALLTINITQNSSALLVLHQNNSVLWSVSVSRKPKNPILQLLDSGNLVLREENDENEEKNYLWQSFDYPGDTLLPEMKLGKDLKTGLDRRLSAWKNESDPSPGSFTWEMDVTNWPEPMQRIGSKKQFNSGPWTGLDYSGKPTRKPSMVFNFTYFSDQNEVYFMFHLVNTSVKARMVMNQSTLKRVHTAWDQNEQQWKVYALLPRDFCDEYGSCGPNGNCDGNKVPACQCLRGFKPKSPRQWNGGKYDEGCVRDTPLDCKSDGFVKYVKMKVPDTEHSWLNQSMNLVECREKCFRNCSCMAYSNSDTRGSGSGSGCAMWFGDLNDLRVHLADAEHDLYVRVPASVLETNNGSKVKIGVAIGGTATILCVLLLVLYFIYIRRSGTMKNNAAVVDHFKEEQEEDLELPLFDLSVIASATNNFSIDNKLGEGGFGPVYKGTMENGQEIAVKRLSRSSGQGLKEFKNEIVLIAKLQHRNLVKLHGCCIHEEEKLLVYEYMPNKSLDLFIFDETQRMLLDWSKRFQIICGIARGILYLHQDSILKIIHRDLKASNVLLDSDMNPKISDFGLAKIFKGDQSAETTGRVVGTYGYMAPEYAIDGNFSVKSDVFSFGILLLEIVSGKKNKANHHDKESTYLVGYVSIDQLSFDHVYPNLYFTMNAT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01206 744 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Aip08g01206 744 ProSiteProfiles Bulb-type lectin domain profile. 24 149 IPR001480 -
Aip08g01206 744 SMART blect_4 30 156 IPR001480 -
Aip08g01206 744 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 722 - -
Aip08g01206 744 ProSiteProfiles Protein kinase domain profile. 506 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01206 744 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Aip08g01206 744 Pfam D-mannose binding lectin 72 182 IPR001480 -
Aip08g01206 744 CDD PAN_AP_plant 341 428 - -
Aip08g01206 744 Gene3D Transferase(Phosphotransferase) domain 1 582 734 - -
Aip08g01206 744 SMART ntp_6 345 427 IPR003609 -
Aip08g01206 744 Pfam Protein tyrosine and serine/threonine kinase 507 715 IPR001245 GO:0004672|GO:0006468
Aip08g01206 744 CDD B_lectin 32 156 IPR001480 -
Aip08g01206 744 Gene3D Phosphorylase Kinase; domain 1 467 581 - -
Aip08g01206 744 Gene3D - 18 153 IPR036426 -
Aip08g01206 744 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 187 IPR036426 -
Aip08g01206 744 Pfam PAN-like domain 345 412 IPR003609 -
Aip08g01206 744 SUPERFAMILY Protein kinase-like (PK-like) 491 720 IPR011009 -
Aip08g01206 744 PANTHER - 26 722 - -
Aip08g01206 744 PIRSF SRK 3 736 IPR024171 GO:0004674
Aip08g01206 744 SMART serkin_6 506 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01206 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01206 Aip-Chr8 17166190 17169764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01206 452 709 Receptor kinase-like Gene Family AT4G23230 61.240 4.94e-102 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01206 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01206 - - adu:107462330 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01206 08 17166190 17169764 Aip08g01206 08 17166190 17169764 ECH