Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01204 ATGCACCTTGCTTTTCATAATGAAGCAGTGAACATAACATTCCGAAACATAGCAGGGCCAAGCAAGCACCAAGCAGTTGTCCTTAGAAGCGGAGCCGACTTATCAGCCTTCTACATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAATGCCGCTGTAGTCTTCCAAAATTGCAACATCTTCTCCGCCTCCCTATGA 267 0.4719 MHLAFHNEAVNITFRNIAGPSKHQAVVLRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFSASL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01204 88 Pfam Pectinesterase 9 85 IPR000070 GO:0030599|GO:0042545
Aip08g01204 88 ProSitePatterns Pectinesterase signature 2. 63 72 IPR033131 -
Aip08g01204 88 Gene3D - 4 87 IPR012334 -
Aip08g01204 88 PANTHER PECTINESTERASE 9 85 - -
Aip08g01204 88 PANTHER PECTINESTERASE 9 85 - -
Aip08g01204 88 SUPERFAMILY Pectin lyase-like 9 85 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01204 Aip-Chr8 17129405 17130328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01204 9 84 Carbohydrate Esterase AT1G02810 80.263 6.25e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01204 K01051 - tcc:18600504 140.584