Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01202 ATGGCAGAAGATCAATTTCAGGCAAGTGGAAACTGGTGGGAGAATCCAGCTATCAGGAACAATTGGCAACCGCATCAGCAACAACAAGATGAATCAGATCACATGATGAAACCAACAAGGGTTTCTATGGATTCCTCGGGTGGTGGCGCTGCCGGTGGCGGTTCGTCTTCTGTGGTGTTCCATGACCCACAGAAGCTTCAGCCTCCGGATTCTGCCGCGGCCGCCACTTCTTCCACTGACCCCAACTTGCACTTTATGGCTTTAGGCCTCTCTTCCCCGCCCATCGATTGGAATCAACAACCATCCTTCTTCTTCAGGTCGATGCTACAAGAAGAGGGTGGAGGCGGCGGCGGCATGGGGTTGTCAGCACAACAAGTCCATCAATGGAGATCAGCGGAAAGCGAATTCAAGAACAATAGAGGTTTCTGTTTGGAGCAAAACCAATTCAGTCCTCAATATAGCTCCGGTGACAGCACAGTAACAAGCCAACAAGGATTTCATCACCAACACATGGATCATTCCGCAGTTCTATACGGTAGCCCTTCATCAATCTTACAAGGACTATTAGGACCTGATCATCATCAACAACAAGCTAATCATAATTTTTCATATCCAACTTCAAACTATGGGTTGAGTTCTTCTAGTAGCAATGACTTTGTGCCTTCTTCTTCTTCTTCTAATTGGTCTAATAACAACAACAATAATAATAATAACAATAAAGTGCCTCAGTTCTTGAGAGGCTCGCCACCAAAACAGTTATCCAATTCCTCATCATCACCGATAACAACGACAAACACTAGTTTGCATTTCACAAACAACGCTCCTTTTTGGAACGCTGCTGCTTCTGACCCTAAAGATGTTAGGTCCACCACCTTCTTCCCTAATTCATTGCAGCCACCATTCTTCACTAATCCAAGTTTTGATGTCCAATCTAAGAATATGAGTGAAATGAGGGATTCAGGTGCAGTGGTGAAGAAAAGTGGGAGTGAACCAACACCCAAAAGGCCTCGGAACGAAACTACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCAATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCGTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGGGTTCCGGTAAATCTAAGGAAGGTGAGGGTCCAAAACAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAATGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTTGGAGGAGGTTCAAGATAG 1380 0.4486 MAEDQFQASGNWWENPAIRNNWQPHQQQQDESDHMMKPTRVSMDSSGGGAAGGGSSSVVFHDPQKLQPPDSAAAATSSTDPNLHFMALGLSSPPIDWNQQPSFFFRSMLQEEGGGGGGMGLSAQQVHQWRSAESEFKNNRGFCLEQNQFSPQYSSGDSTVTSQQGFHHQHMDHSAVLYGSPSSILQGLLGPDHHQQQANHNFSYPTSNYGLSSSSSNDFVPSSSSSNWSNNNNNNNNNNKVPQFLRGSPPKQLSNSSSSPITTTNTSLHFTNNAPFWNAAASDPKDVRSTTFFPNSLQPPFFTNPSFDVQSKNMSEMRDSGAVVKKSGSEPTPKRPRNETTPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQGSGKSKEGEGPKQDLRSRGLCLVPVSSTFPMTHETTVDFWTPTFGGGSR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01202 459 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 349 404 IPR036638 GO:0046983
Aip08g01202 459 SMART finulus 350 394 IPR011598 GO:0046983
Aip08g01202 459 MobiDBLite consensus disorder prediction 213 266 - -
Aip08g01202 459 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 447 - -
Aip08g01202 459 MobiDBLite consensus disorder prediction 187 206 - -
Aip08g01202 459 MobiDBLite consensus disorder prediction 305 345 - -
Aip08g01202 459 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 388 IPR011598 GO:0046983
Aip08g01202 459 MobiDBLite consensus disorder prediction 1 78 - -
Aip08g01202 459 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 51 447 - -
Aip08g01202 459 MobiDBLite consensus disorder prediction 189 206 - -
Aip08g01202 459 CDD bHLH_AtbHLH_like 345 396 IPR045239 -
Aip08g01202 459 MobiDBLite consensus disorder prediction 405 427 - -
Aip08g01202 459 Gene3D - 349 404 IPR036638 GO:0046983
Aip08g01202 459 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01202 Aip-Chr8 17098491 17104298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01202 129 459 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.011 1.02e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01202 - - ahf:112772433 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01202 08 17098491 17104298 Aip08g01202 08 17098491 17104298 ECH