Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01176 ATGATTGTTGCAACATCAACAAACATATCTAGTAGGTGCATTTTCGGGCTAAGGTTCGAAACCAGTGATGATGGTAGAAAAAGCATTACTAAGGTTGTGAGAAAGATGATGTCACAATTAACAACACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGTGGGTTGATGTTCTTACAGGTTTCATGTCAAGATTAAAAGTTACTTTTGCTGAATTAGATGCGTTTTTAGAAGAGGTTATTGAAGAGCATAAGAGAAAGAAAAATTGTGATGATAATAATAAAGATTTCGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAATCACTCCTCTTGGTTTGTGACACTGTTTCAACAACTATTGAATGGGGCTTTGCAGAACTTGCTAATAATCCAAAGATCATGAAGAAAGTACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATAATAGAGGAAAGTGATCTAAATCAAATGAACTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGATACCACATTCCCAAAAAAGTAACCGTATATATAAATTCATATGCAATTCATAGAGATCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTAACCAACAAGTTGATTATAAGGTAATAGATTTTCAATTGATCCCATTTGGTTTTGGGAGGAGGGGTTGTCCTGGAATTTCATTTGGGGTTGCTTCTGTTGAGTATATGATGGCTAATCTTCTCTATTGGTTTGATTGGAAGGTTCCTAATAATAATAAAAGTGCATTGATAGATATGAGTGAGTTTAATGGGTTGAGCGTTACCAAGAAACAACCACTTTATTTGGAGCCAATGCCTTACTTAATTTGTTAA 975 0.3528 MIVATSTNISSRCIFGLRFETSDDGRKSITKVVRKMMSQLTTLGVGDLFPSLDWWVDVLTGFMSRLKVTFAELDAFLEEVIEEHKRKKNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKSLLLVCDTVSTTIEWGFAELANNPKIMKKVQEEVRRIVGGKSIIEESDLNQMNYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGNQQVDYKVIDFQLIPFGFGRRGCPGISFGVASVEYMMANLLYWFDWKVPNNNKSALIDMSEFNGLSVTKKQPLYLEPMPYLIC 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01176 324 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS P450 superfamily signature 255 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS P450 superfamily signature 177 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PANTHER CYTOCHROME P450 71B11-RELATED 1 320 - -
Aip08g01176 324 SUPERFAMILY Cytochrome P450 4 318 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 257 266 IPR017972 GO:0005506|GO:0016705
Aip08g01176 324 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 320 - -
Aip08g01176 324 Pfam Cytochrome P450 5 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 Gene3D Cytochrome P450 1 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 254 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 217 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 264 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g01176 324 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01176 Aip-Chr8 16421211 16422823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01176 6 318 Cytochrome P450 AT3G26310 41.250 2.51e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01176 K20617 - aip:107632412 530.791