Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01170 ATGTCTGCCTCGTGGTCGTGTCCTCTGCAATCACCATCTCCTCCGCCGTCGTGTCATGTGCGGTGGCGTTGTGGTCTTCATTGGTATTTGTTCCGTCATGTGTGCCGTCGCCCTATGGTCGTCATCGCAGGGGTCTTTGTGGTGGTGGTCGTCATCGTTGTTCGTGGTCACCGTCAGCTCTGCTTTTCTGCTGAAATTGACCGAGTAAAGTACAAGAACATATCATCAGTATTCGGAGTTCTAATGAAGGAGCAAGGAATGAGAGGGTTCTTCAGGTGTTGGGTCCCAACACTGCTTGGGTACAGTGCTCAGGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAGAAATACTACTAA 360 0.4944 MSASWSCPLQSPSPPPSCHVRWRCGLHWYLFRHVCRRPMVVIAGVFVVVVVIVVRGHRQLCFSAEIDRVKYKNISSVFGVLMKEQGMRGFFRCWVPTLLGYSAQGACKFGFYEFFKKYY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01170 119 PANTHER PHOSPHATE CARRIER PROTEIN 62 119 - -
Aip08g01170 119 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 62 119 IPR044677 GO:0005315|GO:1990547
Aip08g01170 119 Pfam Mitochondrial carrier protein 69 119 IPR018108 -
Aip08g01170 119 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 118 IPR018108 -
Aip08g01170 119 Gene3D Mitochondrial carrier domain 25 119 IPR023395 -
Aip08g01170 119 SUPERFAMILY Mitochondrial carrier 49 118 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01170 Aip-Chr8 16345778 16346610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01170 65 119 Chloroplast and Mitochondria Gene Families AT5G14040 78.182 2.85e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01170 K15102 - han:110911304 77.7962