Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01166 ATGAGACTTCTCAAGTCTCAGAAGAGTCCTGATGTTTGCTGGCCATTGGATGATAATAATGTTGCAAATGATGCATCTACAGAATTTGATCTTGTAGATCATTCTGGCAGTATGGTTCTAGATCTTGGCTCTGCTCGAAATCCTATTAGTTTCACTTTTACTTATTTGGTGCCTGTGTGTTTTAGATGCCATTTCATCTGGCAGTATGGTTCTAGATATTTGTTCGTTAGATGTGACAATGAACCAGCTCCATGGATTGCTGATATTCTGAAAGCACTACACGACTTGCTTCCAAATCAAGCAGAGGGTAGTCAAGCTTATATACTGGACGACATTATCGACCATGTTAAATATTTGCAGCTTCAATTAAAGGAACTAAGTGGAAGTAGACTACAAGCTGAATCAACTGCTATACCACTGGTTTTCCATGAGGGTTATGGGCATTATATTGACCAGCAGAAGCTGAATGAACCACTTGAAGAGATGATGGGGAAACTTCTTGAAGAGAATCCTGCATCTGCCAGTCAGCTGCTGGAGAACAATGGTCTTGTCCTGCTGCCTATGGAGTTGGTTCAAGACTTGTACCAATCCATGCAAATCTTCGGCAACAGCAATGCACTTGTCTGA 627 0.4131 MRLLKSQKSPDVCWPLDDNNVANDASTEFDLVDHSGSMVLDLGSARNPISFTFTYLVPVCFRCHFIWQYGSRYLFVRCDNEPAPWIADILKALHDLLPNQAEGSQAYILDDIIDHVKYLQLQLKELSGSRLQAESTAIPLVFHEGYGHYIDQQKLNEPLEEMMGKLLEENPASASQLLENNGLVLLPMELVQDLYQSMQIFGNSNALV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01166 208 CDD bHLH_AtbHLH_like 86 127 IPR045239 -
Aip08g01166 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 134 IPR036638 GO:0046983
Aip08g01166 208 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 86 191 - -
Aip08g01166 208 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01166 Aip-Chr8 16161609 16163126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01166 86 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 37.838 2.26e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01166 - - aip:107610608 425.631