Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01133 ATGCCAACAGTGTGGTTCTCACTGAAGAGGTCACTACACTGCAAATCAGATGCATCAGAAGTTCATGATCCTAAATCAAGGAAGCAGCAATTGAGCACAATCTTAACCACAAAGAGGGCATCAGGTAGGTCAGGATGCTCAAGGTCCATTGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATTGAGAAGCCACCAACTTGCAGCCCAAGATCCATAGGTAGCAGTGAGTTCCTCAACCCCATAACACATGAAGTCATCTTGAGCAATTCAAGGTGTGAACTCAAAATCACTGGCTATGGTGGAGGCTTCCATGAAGGGCTTGGAACTGTTGGTAACAATGGTAATAACAACAATGGTGGTGCTCTTGGTAGTGAAAATTCAACCTTTGTTGGAACTTTAAGGCCTGGTACCCCTGGACCTGGAGGGCACCCTACAATGCACTACTTTAACCCTTCCTTTAGGCCTTCAACCACCCCACCAAGGAAATCTCCTTTCCTTTTAGGAGATAGTAATAAAGAAGGGTCTGGCTTCCATGGTGGTGGTGGTGCTGCTGCTGGATTTCATCATTCAAGCAATAGATTGTCTCTTGAGACAGATTCCAATGGGGCTTGCACTGTTACTTGTCACAAATGTGGAGAGCAATTCACCAAATGGGATGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTAACTGAACTTGTGGAAGGTGATTCTTCAAGAAAAATAGTGGAGATAATATGCAGGACAAGCTGGTTGAAATCAGAGAACCAATGTGGTAGAATTGAGAGAGTGTTGAAAGTGCACAACATGCAGAAGACATTGGCAAGGTTTGAAGAATACAGAGAGATGGTGAAGATCAAAGCAAGCAAGCTCCAAAAGAAGCATCCAAGGTGCCTTGCTGATGGGAATGAACTCTTAAGGATCATAAGAAATGGTTTTTCAGCCAAGAAGGAACTCAAGGGTGGAATTGGTGTTTTCACCACTTCAACAAGTGGAAGAGCCTTTGAATCCATTGAGGTAATTGATCAAGACCCTTCACTGAGAAAAGTGTTGATAGTCTGTAGAGTTATTGCTGGTAGGGTCCATAGGCCTCTAGAGAACATTCAAGAGATTGCAGGCCAAACAGGATTTGATTCTCTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCCTGA 1248 0.4383 MPTVWFSLKRSLHCKSDASEVHDPKSRKQQLSTILTTKRASGRSGCSRSIANLKDVIHGSKRHIEKPPTCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGGFHEGLGTVGNNGNNNNGGALGSENSTFVGTLRPGTPGPGGHPTMHYFNPSFRPSTTPPRKSPFLLGDSNKEGSGFHGGGGAAAGFHHSSNRLSLETDSNGACTVTCHKCGEQFTKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEVIDQDPSLRKVLIVCRVIAGRVHRPLENIQEIAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01133 415 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 311 - -
Aip08g01133 415 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Aip08g01133 415 Gene3D - 223 414 - -
Aip08g01133 415 PANTHER - 2 311 - -
Aip08g01133 415 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 311 415 - -
Aip08g01133 415 PANTHER - 311 415 - -
Aip08g01133 415 SUPERFAMILY ADP-ribosylation 234 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01133 Aip-Chr8 15251137 15252951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01133 1 415 C2H2 Transcription Factor Family AT5G54630 61.864 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip08g01133 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01133 - - gmx:100785097 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01133 08 15251137 15252951 Aip08g01133 08 15251137 15252951 ECH