Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01132 ATGAAAATCCAACAATATTATTATATGGGTGTCATAAAGGCTAGCTTTTGCATTGTTTTGGTTCTTTATCTTGTGGGAGCAATTATTAGTCTTGAAGAAAAGAGGAAGCAAGAAGCACAAGAAGAACTCCTTATCCAACTATTTGATCCTAAATCTGAAATTTTTGATAAAGATACGGCAGAGTTATTATGGACTACTTGCTGGGAGGATTTGATTAAAATTGAAGATCTTGATTCATGCCCCATACAATCACCAAGTAACACGAATGAAATTAGTTTAGAAAGAGGAATAATAGCTCAAAGAAACATTGAAAATGTGATTAACAATTGCCAACCCCAATTGAGGGAAGGTTTCCTTGATTGCTTGAGAAGACACAATCCCCTCATCCATGTCTCAAAGAACAGTTTGCATGCAAGTTATGTGAGATTACTCTCTTCCAGAAGAAACTTGGGTCATGTTTTGCTCCAAGATGTGTCAAGAGCAGAAGATGTTGGAGATGAATCGGTGCAAACTAAAACTAAAACGGAAAACACTGCTCCAAAAGAGAGTGGAAGCGAACAAAATGTGTTTGTTATCGTAGGTATAACTGCAGTGTCATCATTTGGAATTGCAGCATTTGTTTTCATATTTTGTTGTAGATGTAGCAGAGCAAATGTTGATCAAACTGATGAGAAACCTCTTCTCAGCTTGTGTAGGACTGACTACTCCAATGGGTCCTTTAACAGTAGAAATCCTCCGCAGGAGTCAATGAAAAAAGAAGACAGCATTGAGACTCTTATGTCAAGTAAAATTTTATTCGATGACAATAAAAATAAAAACTTAGCGCATGAAATATATTCAATGCGATTAGCAGGACCGTATGAAATAAGTTCGGTAGGATTAGGAGGAGCTGATGCTTCTGTTGCCGCTTCGGCAAGACCATCAATGGACTTGAAACCTCCTCCCGGCAGGGTTGGACCACCGTTACCTTTGAAACCTCCTCCTGGAAGGCCAAATCCTCCCTCCGACCCACCAATTCCTCCTCCTTCCGCTGATGAAAATAATCCTCCTCTTCCGCCTCCTCCTGCTGCTGATGCTCCTCCTCCTCCTCCACCGCCAAAGCCGAGTAATGCTCCACCACCTCCTGCACCGCCACCGATTAGAGGTGGTGGGCCTCCGCCTCCTCCACCACCAGATGGAAAAGGCCCTCCACCTCCCCCTCCACCAGGTGTGAAAGGCCCAGGCCCAGGCCCTCCTCCACCACCAGCACTTAAGGGAGGAGGTGGTCCACGACCTCCTGGACCACCTCCTCTAAAAGGTGCGATTGGTGGGAAGGCTAGGCCTCCAGGACGAGGACCCGAAGGTCCTGGAGGTGTTCCCAAGCCAAAACTTAAGCCTTTCTTCTGGGATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAGGATCCTTCCAGTTCAATGAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTGCTCAAGAAAAATCTAAACCCGGAATGAAGAAAGAATCTCGTGAACAAACTCCTCAATATATTCAGATCATTGAACCAAAGAAAGCACAGAATTTGTCAATTCTGTTGAAAGCATTGAATGTAACACTAGAAGAAGTTCGTGATGCACTCCTTGAAGGAAATGAAATACCCCCAGAATTCCTAAACACTTTGTTGAAGATGGCCCCAAGTCAAGAGGAAGAACTAAAGCTCAGACTTAGACGATGA 1740 0.4362 MKIQQYYYMGVIKASFCIVLVLYLVGAIISLEEKRKQEAQEELLIQLFDPKSEIFDKDTAELLWTTCWEDLIKIEDLDSCPIQSPSNTNEISLERGIIAQRNIENVINNCQPQLREGFLDCLRRHNPLIHVSKNSLHASYVRLLSSRRNLGHVLLQDVSRAEDVGDESVQTKTKTENTAPKESGSEQNVFVIVGITAVSSFGIAAFVFIFCCRCSRANVDQTDEKPLLSLCRTDYSNGSFNSRNPPQESMKKEDSIETLMSSKILFDDNKNKNLAHEIYSMRLAGPYEISSVGLGGADASVAASARPSMDLKPPPGRVGPPLPLKPPPGRPNPPSDPPIPPPSADENNPPLPPPPAADAPPPPPPPKPSNAPPPPAPPPIRGGGPPPPPPPDGKGPPPPPPPGVKGPGPGPPPPPALKGGGGPRPPGPPPLKGAIGGKARPPGRGPEGPGGVPKPKLKPFFWDKVQANSDQAMVWNQLKAGSFQFNEEMMESLFGYNAAQEKSKPGMKKESREQTPQYIQIIEPKKAQNLSILLKALNVTLEEVRDALLEGNEIPPEFLNTLLKMAPSQEEELKLRLRR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01132 579 Pfam Formin Homology 2 Domain 453 576 IPR015425 -
Aip08g01132 579 PANTHER FORMIN-RELATED 2 135 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip08g01132 579 ProSiteProfiles Formin homology-2 (FH2) domain profile. 447 579 IPR015425 -
Aip08g01132 579 PANTHER FORMIN-RELATED 185 577 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip08g01132 579 SUPERFAMILY Formin homology 2 domain (FH2 domain) 516 576 - -
Aip08g01132 579 PANTHER FORMIN-LIKE PROTEIN 2 135 - -
Aip08g01132 579 PANTHER FORMIN-LIKE PROTEIN 185 577 - -
Aip08g01132 579 MobiDBLite consensus disorder prediction 305 458 - -
Aip08g01132 579 Coils Coil 527 547 - -
Aip08g01132 579 MobiDBLite consensus disorder prediction 313 432 - -
Aip08g01132 579 Gene3D Formin, FH2 domain 450 578 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01132 Aip-Chr8 15240448 15243296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01132 453 577 FH2 protein (formin) Gene Family AT5G54650 66.400 1.46e-46 174