Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01124 ATGTCTGATAGTGAGTCGGATTTGGATGATGGCAACACATCAGAGTTGTCAAGCCATTGGACTGATGGTTGGAGCACCGATTCGGGAGATGGGGATGATTTGAACGGGTTGGAGGAACGGCTGACTGAGGAAGGGGATAGTGGCCATGCAGACAGTGAATACAAAGGCAGGGATGGTGGTGAAAGCGATAAGCATGCTTCCGCAGAGGATCATGCAAACTTCGAGAATGTCATGGGTACACAATTCAACTGTCCAGACCCTGTGATTGGTTCTGTGTTGTTACATGCAGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTCGCGTATGCAAAGGGTATTGGTTTTGCAGTGCGAAAGGGAGATTCTATTAAAGACGAGGAGGGGAATATTGTTAGGAAGTTTTTCTACTGCAATCGGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGACAGAAAAATGACTCATAAACCGGAGATGAGAACGAATTGCAATGCCAAGCTTGTGGTGTTTCTGGACAAAAGTTGTGGGAAATGGCGGACGAAAACATTGGTCAAGGAACATAATCACGAATTGGCGCCCCAAGAGTTCACTAATGTCATAGCTCCACATAGAAAGATCCCAGAAGGGCACAAAGCGCATATACATAGCATGCATGAAGCTGGGTTCCAAACAACTCAAATAATGGGCTTCTTGCCCACATGTGTGGTGGATATCGGAATCTTAACTTCATAA 744 0.457 MSDSESDLDDGNTSELSSHWTDGWSTDSGDGDDLNGLEERLTEEGDSGHADSEYKGRDGGESDKHASAEDHANFENVMGTQFNCPDPVIGSVLLHAEFNGIGDAYASYVAYAKGIGFAVRKGDSIKDEEGNIVRKFFYCNRQGLREKKHYERVDRKMTHKPEMRTNCNAKLVVFLDKSCGKWRTKTLVKEHNHELAPQEFTNVIAPHRKIPEGHKAHIHSMHEAGFQTTQIMGFLPTCVVDIGILTS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01124 247 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 78 199 - -
Aip08g01124 247 Pfam FAR1 DNA-binding domain 108 197 IPR004330 -
Aip08g01124 247 MobiDBLite consensus disorder prediction 11 25 - -
Aip08g01124 247 MobiDBLite consensus disorder prediction 1 66 - -
Aip08g01124 247 MobiDBLite consensus disorder prediction 33 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01124 Aip-Chr8 15167769 15168512 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01124 FAR1 2.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01124 - - aip:107610720 414.075