Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01122 ATGGATGAGACTGGATATGAAATGTTGGATGAAGAAGCCGGTGACTATGGAGATGTGTTGCAGTTGAGTAAGGAAGAGATAATGAATAAGGCTTTCCGAAGCGATGAAGCAGCATATGAATTTTACAGGAGGTTCAGCAAATGTTTTGGTTTTGGTATTCGAAAGGGTGACTTGGGAAAAGATGAAAGTGGAAGGGTTATTCGTTGTAGATTTTTTTGTAATAGAGCCGGCCTGCGACAACGTCATCACTATGATAGGCTAGATAGGCAGAGAGGTCATAGACCAGAAACGCACACAAATTGTCAGGCAAAGCTGTCAGTCTACCTTGATGTGGCTCATGGTGTTTCGACGTCCAAGATTATGGGGTATATGGCTGGACAGGCTGGTGGCTATTCTCTAATGGGCTTCACTAAGAAGGATGCTTACAATTATATTAACAAGGCTAAGCGTGCAAAGATTATTGATGGGGACGCCAACGCGGCTGTTGTATACTTGGAGGGAAAAGCGAGGGCAGATCCGATGTCGATGGCTAGGTATAATCTTACTAAGGATAATATGCTGGCCAATATGTTTTGGGCGGATGGTGGTAGTAGAGTTGATTACCAATACTTTGGGAATGTTCTAGCCTTTGATTCGACCTACAAGAAAAATAAATATCAGAGGCCGCTGGTGATATTTTCTGGTGTGAATAACCATAAGCAGACGACAATATTTGGGTTTGGGTTTGTGTTAGATGAAAGTGTTGGGCCTTATAAGTGGTTGCTGGAAAATTTGTTGGAAGTCATGTGTAACAAGAAGCCGTCAGTTGTCGTCACGGATGGCTGTAATTCAATGAAAGCTGCAATCAAGTCTGTTTTTCCAGAGGCAACGCATCGATTGTGTGCTTGGCATATGGAGAAGAACGTAACTGCTAATGTGAAGGAAGAGGGACTGCGGCAATGTTTCACCCGGTGGCTGTACTCGGAGATGGAAATAGATGAATTTGAGGCTGAGTGGGATGATGCAGTTGAAGAGTATGGGTTGCAAAACAGTTTTTGGGCCAAAGAAACTTTTCAAAAAAGGATGATGTGGGCTAATGCGTATCTACAAGACAAGTTCTGTGCAGGCTTTCGGACAACATCCCGGTGCGAAGGCATTAACGCGTATGTGAAGAATTTCCTTAAGTCTAGGCACAGTCTCCTTGATATGGTTCAAAATTTGGAGTTGGTTGTGCGAGAGTACCGCAATAATGAATTGCTTGCACAATTTAGATCATTCCATGGGATGCCGGTTATGACAACTTGTTTGGATCCTCTTGAAAAGTATGCTGCAGATGCATACACGCGGGAGATATTCGTTGATGCGAAGAAGGAAATAGTGGGTGCCGGTGCAGTTAATTTTGTAGCCAAGATTAGACGTTCAACTACAATGGTGTACACATTGGAGGAATATGGAGACCCAGGTAGAGAGGTGATTGTGTTGTACGATAGGGTTTCAATGAAAATGGAGTGCCGATGCAATTTTTGGAGCCAAAAGGGAATTCCTTGTCGTCACATGTTTTTTGTAATGAAGCATGAGCATTTGACTCGAATTCCTGAAAGGATGGATTTGAAGAGGCGGCGCAAGGATGCAAAGTCGTTGGATAAATATGCCGAGATAGAGGAAGTTGGTAGTGAAAGGGATTTGTTGTTGCGCCATGGTGCACTTCATGCAGCCGCACGGTGGATGCTATATGTCGGAGCTAGGAGCCAATTCCTCTTTCACACAGGCGCTTAA 1755 0.4382 MDETGYEMLDEEAGDYGDVLQLSKEEIMNKAFRSDEAAYEFYRRFSKCFGFGIRKGDLGKDESGRVIRCRFFCNRAGLRQRHHYDRLDRQRGHRPETHTNCQAKLSVYLDVAHGVSTSKIMGYMAGQAGGYSLMGFTKKDAYNYINKAKRAKIIDGDANAAVVYLEGKARADPMSMARYNLTKDNMLANMFWADGGSRVDYQYFGNVLAFDSTYKKNKYQRPLVIFSGVNNHKQTTIFGFGFVLDESVGPYKWLLENLLEVMCNKKPSVVVTDGCNSMKAAIKSVFPEATHRLCAWHMEKNVTANVKEEGLRQCFTRWLYSEMEIDEFEAEWDDAVEEYGLQNSFWAKETFQKRMMWANAYLQDKFCAGFRTTSRCEGINAYVKNFLKSRHSLLDMVQNLELVVREYRNNELLAQFRSFHGMPVMTTCLDPLEKYAADAYTREIFVDAKKEIVGAGAVNFVAKIRRSTTMVYTLEEYGDPGREVIVLYDRVSMKMECRCNFWSQKGIPCRHMFFVMKHEHLTRIPERMDLKRRRKDAKSLDKYAEIEEVGSERDLLLRHGALHAAARWMLYVGARSQFLFHTGA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01122 584 ProSiteProfiles Zinc finger SWIM-type profile. 482 520 IPR007527 GO:0008270
Aip08g01122 584 Pfam MULE transposase domain 207 301 IPR018289 -
Aip08g01122 584 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 542 IPR031052 GO:0006355
Aip08g01122 584 Pfam FAR1 DNA-binding domain 40 109 IPR004330 -
Aip08g01122 584 PANTHER OS01G0607050 PROTEIN 27 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01122 Aip-Chr8 15125428 15127318 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01122 MULE 9.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01122 - - aip:110265238 1125.15