Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01095 ATGCAGGGGTATGGTGGAATCGATCTTGCACGTTTAGCAAGACTGTCCTTTGGCATTCAGAATGGTTTCAATCCGATTCGGTTCTTTCACCCTCGTTCTTGCCATATCGAAACCCTAACTAGGAGCAGGTTTCAACAATCTGTTGGTAGGACCTTTGTTTCTGAGAGAGAGTTAAGGTTCATGTCTGAATTAGACGCTCAGATTCCTACTACCTTCGATCCTTTTGCTGAGGCAAATGCTGAGGACTCGGGTGCTGGGTCAAAAGAGTATGTGCATATTCGCATACAGCAGCGGAATGGTAGGAAAAGCTTGACAACTGTCCAGGGATTGAAGAAAGAATTCAGCTACAACAAGATACTTAAAGACCTTAAGAAGGAGTTCTGTTGCAATGGTACAGTTGTTCAGGACCCAGAATTAGGGCAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTGTCTACCTTCCTAGTTCAGGCTGGTATCGTGAAGAAGGAGCATATCAAAATTCATGGTTTCTGA 522 0.4387 MQGYGGIDLARLARLSFGIQNGFNPIRFFHPRSCHIETLTRSRFQQSVGRTFVSERELRFMSELDAQIPTTFDPFAEANAEDSGAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01095 173 Pfam Translation initiation factor SUI1 88 162 IPR001950 GO:0003743|GO:0006413
Aip08g01095 173 Gene3D - 52 173 - -
Aip08g01095 173 SUPERFAMILY eIF1-like 56 173 IPR036877 GO:0003743|GO:0006413
Aip08g01095 173 CDD eIF1_SUI1 89 172 IPR005874 GO:0003743
Aip08g01095 173 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 61 173 - -
Aip08g01095 173 ProSiteProfiles Translation initiation factor SUI1 family profile. 91 161 IPR001950 GO:0003743|GO:0006413
Aip08g01095 173 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 66 173 IPR005874 GO:0003743
Aip08g01095 173 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 61 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01095 Aip-Chr8 14497050 14501616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01095 61 173 Eukaryotic Initiation Factors Gene Family AT4G27130 89.381 2.43e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01095 K03113 - jre:108983673 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01095 08 14497050 14501616 Aip08g01095 08 14497050 14501616 ECH