Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01094 ATGGAGGAACTCTTCGTAGCTATACTTTCGATGCTTCTGGTTGTAGCACTGATTCCACTGTACTTATGGAAACGCCGCCAGGATTCTCAACCACATCCTCACGCCGATGAACCGGTCCAGGCTCCCCGGAGAGAAGCGGTGGTGCGCCCAGCCGGAAACCGCCGAATGCGTCGGAGACCTGCTGCATCTGGAGCTAGCAGTTCGACAGCTCCGCCTGCAACTGCCGAAGAGTCTGGCGATGAAAGTGAGAATGAAGCTGCTGGTGGCGAGAATTACGAGGCTAGAGCAGCAAAGAAAAAGGAGATTAAAAGGCAAGAGAGGGAAGCTCGCCGACAGGCTGAAGATGCTGCACGAGAGTCGAAGCAGGCCAAACAAGATCGTTACTCAGAGATGCGGAGGTTGAAGGATGAAGAACGTGAGGCAAAGGAGCGTCAGTTGGAAGAGGAAGCCAAAGCTCAGAAGGCTAAGGAGGAGGAGGCTGCGGCAATAGAGTTTGAGAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACCCTTGAAGAAGAACAGGATGGTACTGAAGACTTGCTATCCAATTTTGTTGAATATATACAGAAGCAGAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAGTTGCGAACGCAGGAATGTATCAACCGCATCACCAATCTGGAAAGTATGGGCCGGCTTTCGGGTGTGATGGATGATAGAGGGAAATACATATACATCTCGCAGGAAGAAATGAAAGCTGTTGCTGATTATGTTAAGCGGCAGGGAAGAGTTAGCATTTCACACCTAGCTAGTAAATCGAACCAGTTCATTGATTTAGAGCCAAAAACTCAATTCACAGAGGACATTACAGCTGCGGCTACAGATGATGCAGACGGGGTCGCCGTCAAAAAGGCCAAGCCTGTCAAGGGGGCCGTCGTGACCACAGCTGCACCAGCGACCGACGTTGAGGTAATTCCAGCTCCTCCGCCTCCACCAGCAGAACTGCAGGTCTGCAATGGCGTGTTCCTAACATACACGCTGATATCACGCGAGAAGGAATACCCATTCGTGAAGAACAAGTCAAATCAAGCATATGCCTTCACGTCCCAAGCCACGATTACAAACGTCGGTGACGAGGAGGTGAAGGGCTGGAGGATGTACATTGGGTTCCAACACCGAGAAATATTGGTTTCCATGGACGGCGCCGTCCCCATCGACGCCGAGGACTTCCCGGCTGCCGTAGGGAACGGCACCACGATCGCCGGAAACCCAATGGTGGATCTAAAGACTGCGATCTTGACGGCTAATGATTTTACTCAAATGTCGGTGAGAGTTGGAATGAAAGGATCACAGTTCGGTCTTGGTGATGGCGCCACCCCTATGCCTAAGACCATTAAGCTTATCAATAGTGGCTTCAAGTGTCCCGCCTCTTCTCGCAGAGGGTCAACAATGATAGTGTGTTGTAGAAAAGACCCTAAAGCGAAGGCATTGGCACTTAAGAAGACAAAGTACCCATCACGTGGCAAAGGGGATTTAACCATTTCATACGACGTTCTACAAGCTTACCAGACGAGCTACTATGCTGAGGTGACCATCCAAAACAACCACCCGTTGGGGCGGCTGGACCACTGGAACCTCACGTGGGAATGGCAGAGGGGCGAGTTCATCTACAGCATGAAAGGTGCCTTCGCGCGCGTCAAGGACCCTTCGGAATGCTTGTATGGCCCTGCAGGCCAGTACTACAGGGACTTTGATTTCACCCAAGTCGCCAATTGCGAGAAGAGGCCCATTATCTCTGATCTTCCTTCTGAGAGAAAAGACGATGAAAAGGTGGGGAAGCTACCATGGTGCTGCAGGAATGGCACAGTGCTATCACCTGTGATGGATAGGAACCAAGCCAGGTCAATGTTCCAGCTCCAAGTTTTCAAGATTCCACCAGATAACAACAGAACAGCACTCACACCACCCATGAAATGGAAGATCGACGGCGTCATCAACCCCCACTACAAGTGCGGCCCACCGGTCAGAGTGGACCCCGCAGAGTACCCTGACCCATCAGGTCTCCAGGCTATTCACACCGCCGTCGCAAGTTGGCACATCGTTTGCAACATGACAAAGCCACAGCCTCAGAAAACAAGGTGCTGCGTCTCATTCTCTGCATTCTACAACGAATCCGCCATCCCCTGCAACACTTGCGCTTGTGGCGGTTGTGACGGTTACCAGCAATGCAACGCAAAGGCACCACCCATGCTTATTCCACCCGACGCGCTTCTCGTTCCGTTTGTTAACAGAACCGCCAAGATGAAAGCGTGGGCCAAGATGAAGCATTTCAAGATTCCCAAACGGATGCCTTGCGGCGATAACTGTCCCGTTAGCATCAACTGGCACGTCAACTCCGACTACAAAACTGGATGGACAGCAAGGATCACGCTTTTCAACTGGGAGCGCTACGCCTTCGATGATTGGTTCACTGCTCTTCAGTTCCACAACAATTCTTTCAGAGATTTCGATGAAGTTTACTCCTTCAACGGAACCAGAATCCCAGGCCTTAGAACCGTCTTCCTTCAAGGATTTAAGGGTTTGAACTATTTGGTGGGACTCACCAACGGAAGCCGCATCGGTGACCCACACGTGCCGGGGAAGCAGCAATCCGTGCTGTCCTTCAAGAAGAAGCATGCCAAGAAATTCAACATCAGAAGAGATGCATTCCCAACGAAGGTTTACTTCAATGGTGAAGAGTGTGCACTCCCTCCAACTACTCCTTCTAATGGTTCCTCACGCATCAAGTCTTCTCCGATCAGTTTCCTTGCTGTCACCATCATCGCATTCTTGTCGTTCTTCGCTGCACCTTTTTTGTCTCATTGGAACACTTCAATATGCTTTATTTTTTTATGCTTCTTCAGGGGTTGTATTGGTCTCATTAAAGAACCATACAAACAAACCGAACGGGGAAGATAG 2958 0.502 MEELFVAILSMLLVVALIPLYLWKRRQDSQPHPHADEPVQAPRREAVVRPAGNRRMRRRPAASGASSSTAPPATAEESGDESENEAAGGENYEARAAKKKEIKRQEREARRQAEDAARESKQAKQDRYSEMRRLKDEEREAKERQLEEEAKAQKAKEEEAAAIEFEKWKGEFSVDDEGTLEEEQDGTEDLLSNFVEYIQKQKCVPLEDLAAEFKLRTQECINRITNLESMGRLSGVMDDRGKYIYISQEEMKAVADYVKRQGRVSISHLASKSNQFIDLEPKTQFTEDITAAATDDADGVAVKKAKPVKGAVVTTAAPATDVEVIPAPPPPPAELQVCNGVFLTYTLISREKEYPFVKNKSNQAYAFTSQATITNVGDEEVKGWRMYIGFQHREILVSMDGAVPIDAEDFPAAVGNGTTIAGNPMVDLKTAILTANDFTQMSVRVGMKGSQFGLGDGATPMPKTIKLINSGFKCPASSRRGSTMIVCCRKDPKAKALALKKTKYPSRGKGDLTISYDVLQAYQTSYYAEVTIQNNHPLGRLDHWNLTWEWQRGEFIYSMKGAFARVKDPSECLYGPAGQYYRDFDFTQVANCEKRPIISDLPSERKDDEKVGKLPWCCRNGTVLSPVMDRNQARSMFQLQVFKIPPDNNRTALTPPMKWKIDGVINPHYKCGPPVRVDPAEYPDPSGLQAIHTAVASWHIVCNMTKPQPQKTRCCVSFSAFYNESAIPCNTCACGGCDGYQQCNAKAPPMLIPPDALLVPFVNRTAKMKAWAKMKHFKIPKRMPCGDNCPVSINWHVNSDYKTGWTARITLFNWERYAFDDWFTALQFHNNSFRDFDEVYSFNGTRIPGLRTVFLQGFKGLNYLVGLTNGSRIGDPHVPGKQQSVLSFKKKHAKKFNIRRDAFPTKVYFNGEECALPPTTPSNGSSRIKSSPISFLAVTIIAFLSFFAAPFLSHWNTSICFIFLCFFRGCIGLIKEPYKQTERGR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01094 985 Gene3D - 189 246 IPR036388 -
Aip08g01094 985 Coils Coil 95 163 - -
Aip08g01094 985 Pfam COBRA-like protein 526 705 IPR006918 GO:0010215|GO:0031225
Aip08g01094 985 Pfam DDRGK domain 95 277 IPR019153 -
Aip08g01094 985 MobiDBLite consensus disorder prediction 92 154 - -
Aip08g01094 985 MobiDBLite consensus disorder prediction 28 52 - -
Aip08g01094 985 MobiDBLite consensus disorder prediction 28 154 - -
Aip08g01094 985 SUPERFAMILY "Winged helix" DNA-binding domain 184 254 IPR036390 -
Aip08g01094 985 SMART DDRGK_2 93 278 IPR019153 -
Aip08g01094 985 PANTHER COBRA-LIKE PROTEIN 10 329 947 - -
Aip08g01094 985 PANTHER COBRA-LIKE PROTEIN 7 329 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01094 Aip-Chr8 14485373 14492198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01094 331 943 COBRA Gene Family AT3G20580 59.128 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01094 - - ahf:112772953 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01094 08 14485373 14492198 Aip08g01094 08 14485373 14492198 ECH