Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01089 ATGGATTGTGAGAATGATTGTTCAGAGAACATCAATGTAACTGAACTTCCAACAATAACACCGTGGAATCACTCTTCAGCAAATGCTCCTCCTTGTGATCAAGAATCATCACATCCAATATTTTCAAACAGAGGCATGGATAATAGCAAAATTTCCTCCGGCGGCTGCGGCAGATTTAATGGAGACCTTCATTGTTCTTCAATAAATCCTCTTTCCGTTCACGAATCAGATCCAAGTTTCCCAAACAGAGGCATGAACAACATGGATGGATTCCATGGAGCAAGTTATGACCTTCATTCTTTTTCAGCAAATGCTCCTCTGCCGCGACAAGAATCAGATCTAATTTTCCCAACCGGAGGCATGATGAACAGCAACATGTGTGGCGGCGGCGGATTCAACCGAGCAAGTGACCTTCTCTTGGTGGTGTCAATGTACGCAGAGCCAACAAAGTCGGAAATCATAGCTCTTGCTAAGTCCGCGATGGATGAATTGTCGAAAATAGCCCTGGAAGGGCAGCCTTTGTGGGTCCCGCAGAAGGACAAGAAGTTCGAAACGCTTAACGATATCGAGTACTTGAGGCAGTTCGGTGAGGTTCAAGAAATTGAATCGATGAAGGAGATTATGAAGCTTGTTGAGGTTGGACAAGAAGAGTCTTCTTCTTCCCAGTACTTGTTGCCAACGGTTGACTCGTTTCGAAGGGAGCTTGTTCCGTTATCTCTCAGTGGAGTTCCCAAAGAAGCTCTTCAAACTGAAGCTTCACGTGATATGGGGGCAGCGGTGCTAGGAAACTTATCAAATGGAGCGGAAGAAAGTTATGATGGGAAAGTGCAAGTGATGTTCGCAGAATATCATTTGCCTACACCATTTGTGCCAGCAAGGGAGTGCTATTTTGCAAGGTACTGCAAGCAATTACCTTATGAAATGTGGGGTGTTGTTGATGTATCCCTTGAGAAGCATTTTCCATCTCTAGCAACCAATTTCCGAAGAAGACCATCAGGCTGCTTGATTAGGCCAATGCCAGACGGATTCTCTAAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAACTGAGCAACCATTTCCGGCCACTAGTAACAACGGGTTTGGGTTTTGGTGCAACTCGTTGGATTAATTCTATAGTTAGGCACACTGAATCATCTAAAATTATGGAGGCTAAATCAGCTCCAATTTATGTGGATTATGGAGTTATAATACCACAAGCTGGAAGGACAAGTTTCCTTAACCTGGCAGACAGACTTGTGAGAAGCTTTTGTGGTGATATCAATGCTTCAATGACGAATCAATGGATGCCATTAATATCTTCAGAATCTGATTCTTCAGATGTGAGGGTGATGATCAGGAATAACATTGAGGATCCTGGGAAACCTATTGCTACAACTGTGGTGTTTAGCACTTGTCTTTGGCTTAACGTCTCACCATCACGGTTGTTCAATTTCTTGCGTCACGAGGATTCAAGAAACAAGTGGGATTTACTTTCACGTAATCTTACAATTCGGGAATTTGCATATATGAACAAAGGCACAAATCCAGGGAATCGTGTTTCCTTAATGCGAGCAATGAAATCTGAAGACAAGATTGAGATCTTTTACATTCAAGAGAGCTACACAGACACAACAGGATCCTATATTGTTTATGCTCCACTAGACGAATTTGCTTTGTCATCTCTTGCAAATGGAGCAAACCCTAACAATGTAATGGTCCTTCCATCAGGATTTTCTATCCTTCCTTGTGGGTTCCCTAGTGATTATATTGATGAGAAGGGTGAAGGTGGAAGCATTTTAACTATTGCGTTTCATACAATTGAGAGTCACAACATTAAACAATTTTTTTCTCTTGAATCAGTTATTGTCATGAAAAAGATTATTTCAGAGACTGTCACCAATATAAAAGATGCTGTGTTGTATAATAATTACACTAACAATTGGCAGTATAACTGA 1965 0.4188 MDCENDCSENINVTELPTITPWNHSSANAPPCDQESSHPIFSNRGMDNSKISSGGCGRFNGDLHCSSINPLSVHESDPSFPNRGMNNMDGFHGASYDLHSFSANAPLPRQESDLIFPTGGMMNSNMCGGGGFNRASDLLLVVSMYAEPTKSEIIALAKSAMDELSKIALEGQPLWVPQKDKKFETLNDIEYLRQFGEVQEIESMKEIMKLVEVGQEESSSSQYLLPTVDSFRRELVPLSLSGVPKEALQTEASRDMGAAVLGNLSNGAEESYDGKVQVMFAEYHLPTPFVPARECYFARYCKQLPYEMWGVVDVSLEKHFPSLATNFRRRPSGCLIRPMPDGFSKVIWVEHVEADHSQLSNHFRPLVTTGLGFGATRWINSIVRHTESSKIMEAKSAPIYVDYGVIIPQAGRTSFLNLADRLVRSFCGDINASMTNQWMPLISSESDSSDVRVMIRNNIEDPGKPIATTVVFSTCLWLNVSPSRLFNFLRHEDSRNKWDLLSRNLTIREFAYMNKGTNPGNRVSLMRAMKSEDKIEIFYIQESYTDTTGSYIVYAPLDEFALSSLANGANPNNVMVLPSGFSILPCGFPSDYIDEKGEGGSILTIAFHTIESHNIKQFFSLESVIVMKKIISETVTNIKDAVLYNNYTNNWQYN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01089 654 Pfam START domain 258 387 IPR002913 GO:0008289
Aip08g01089 654 SUPERFAMILY Bet v1-like 410 614 - -
Aip08g01089 654 SMART START_1 155 388 IPR002913 GO:0008289
Aip08g01089 654 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 258 644 IPR042160 -
Aip08g01089 654 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 133 257 IPR042160 -
Aip08g01089 654 MobiDBLite consensus disorder prediction 22 45 - -
Aip08g01089 654 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 258 644 - -
Aip08g01089 654 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 133 257 - -
Aip08g01089 654 SUPERFAMILY Bet v1-like 150 387 - -
Aip08g01089 654 ProSiteProfiles START domain profile. 146 391 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01089 Aip-Chr8 14357208 14361893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01089 107 642 Homeobox Transcription Factor Family AT4G21750 37.324 1.70e-107 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01089 K09338 - jre:108992281 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01089 08 14357208 14361893 Aip08g01089 08 14357208 14361893 ECH