Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01086 ATGGAAACTATACTTGGTTTTATCAAACTTAGGATTAACAGAGGCATTAATCTTGCAAAACGCGATGCTTATTCAAGCGACCCTTATGTTGTTGTCAAAATGGGTGAACAGAAGCTGAAAACTGCGTTCATACGTAAAAATATTAATCCGGTGTGGAATGAAGAATTGACTCTATACGTTAAGGATGTTGCAACTCCAATATATCTGCAAGTTTTTGACAAAGACACATTCACTAAAGACGATGAAATGGGTGATGCAGTTATAGATTTAAGGCCGTATATTGAGTGTCATTTGATTGGAATGGAGAGTATGCCAGATGGATGTGTGGTGAAGAGAATTCAACCAAATAGAACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGGAGTATAGTCCAACGTATGATGCTAAGATTGAAAAATGTTGAGTGTGGCGAAATAGAGTGTGAAATTGAGTGGCGTGATATTCCTGGCTGTAATGGTTTAGCAGAGCTGATAAAATCTTGA 516 0.3818 METILGFIKLRINRGINLAKRDAYSSDPYVVVKMGEQKLKTAFIRKNINPVWNEELTLYVKDVATPIYLQVFDKDTFTKDDEMGDAVIDLRPYIECHLIGMESMPDGCVVKRIQPNRTNCLAEESTCFWRNGSIVQRMMLRLKNVECGEIECEIEWRDIPGCNGLAELIKS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01086 171 Pfam C2 domain 8 92 IPR000008 -
Aip08g01086 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Aip08g01086 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Aip08g01086 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 157 IPR035892 -
Aip08g01086 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Aip08g01086 171 Gene3D C2 domain 5 161 IPR035892 -
Aip08g01086 171 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01086 Aip-Chr8 14333651 14334378 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01086 38 166 C2H2 Transcription Factor Family AT1G70790 61.069 3.25e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01086 - - gmx:100788395 236.498