Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01078 ATGTTTGTGGCAAATCTTTTAGATCAGAATATGAGTGCTTGTTTGAGTAACAACGGTGAGCATGGTGATGTGTCTCAATTGGCAGACATTGAAGATGACTCCAATGCTAAATTGGAGGTTTGTGTTAGCACTTACGTCTCAGGGAAGCCTTTTGAGGGATCCATCGACATTATTTTGAAGCTGTTGAAGAATGTTATTAGAGAGCCTGAGAATGCCAAGTTTAGGAAGATCAGATTGGGCAATCCTAAAATTAAGAAGGCTGTTGTCGATATTACCAGTGGAACTGAGTTGATTTGCTTTCTTGGCTTTGAACTTAAGGATGAGAATGATGAGACTTGGACCATCATGGAGCTTCTTTTAGAGGAGCAGATAAGATTGATCAAGAAAGCAACACTGTTGCTGGAATCACAGCCGGTGCTGCAAGTATCTCCAAAGAGTGAGAATTTGGCTGCAGCTTCTGCTGACAACATAGATGCAAAGCCTGAATCCAAGCCTATCAACAGACAGGAACTAACTATGGCCCTCTATGAGTTTGTCAGCTCTGTATTGAAACAACCAGGTTTAGAGTTTGAGCTAATGCATCCAGTAGTAATTCGACGCGGACAATCCCTCAGTTAG 618 0.4191 MFVANLLDQNMSACLSNNGEHGDVSQLADIEDDSNAKLEVCVSTYVSGKPFEGSIDIILKLLKNVIREPENAKFRKIRLGNPKIKKAVVDITSGTELICFLGFELKDENDETWTIMELLLEEQIRLIKKATLLLESQPVLQVSPKSENLAAASADNIDAKPESKPINRQELTMALYEFVSSVLKQPGLEFELMHPVVIRRGQSLS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01078 205 CDD PUB 42 136 - -
Aip08g01078 205 Pfam PUB domain 51 124 IPR018997 -
Aip08g01078 205 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 10 169 - -
Aip08g01078 205 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 168 200 - -
Aip08g01078 205 SUPERFAMILY PUG domain-like 46 125 IPR036339 -
Aip08g01078 205 Gene3D - 28 135 - -
Aip08g01078 205 SMART PGNneu 53 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01078 Aip-Chr8 14179251 14185184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01078 10 137 C2H2 Transcription Factor Family AT2G01650 46.512 1.01e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01078 K14011 - gmx:100779271 178.333