Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01077 ATGGAAGATATACTTGGTCTTATCAAACTTAGGATTAAAAGGGGCATTAATCTCGCAAAACGCGATACTTTTTCTAGTGACCCTTATGTTGTTGTCAAAATGGAAGAACAGAAGTTGAAAACTGCGTTCATACGTAAAAATATTAATCCAGAATGGAATGAAGAATTGACTCTTTATGTTAAGGATGTTGCAACTCCAATAACTGTGCAAGTTTATGACAAAGACACATTCACTGCAGACGATGAAATGGGAGATGCATTTATAGACTTAAGGCCGTATATCGGGTGCTATTATTTGATGGGGTTAGAGAGATTGCCAGATGGATGTATGGTAAAGAAAATTCAACCAAATAAGACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGCTGTATAGTCCAAAATATGATACTAAGATTGAAAAATGTTGAGTGCGGCGAAATAGAGTGTGAGATTGAGTGGCGTGATATTCCTGGTTGTAAAGGTTTATCTGGACTAAGATCTTGA 516 0.3721 MEDILGLIKLRIKRGINLAKRDTFSSDPYVVVKMEEQKLKTAFIRKNINPEWNEELTLYVKDVATPITVQVYDKDTFTADDEMGDAFIDLRPYIGCYYLMGLERLPDGCMVKKIQPNKTNCLAEESTCFWRNGCIVQNMILRLKNVECGEIECEIEWRDIPGCKGLSGLRS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01077 171 Pfam C2 domain 7 92 IPR000008 -
Aip08g01077 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Aip08g01077 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 164 - -
Aip08g01077 171 Gene3D C2 domain 4 162 IPR035892 -
Aip08g01077 171 PRINTS C2 domain signature 22 34 IPR000008 -
Aip08g01077 171 PRINTS C2 domain signature 46 59 IPR000008 -
Aip08g01077 171 PRINTS C2 domain signature 67 75 IPR000008 -
Aip08g01077 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Aip08g01077 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Aip08g01077 171 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01077 Aip-Chr8 14173807 14174526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01077 38 167 C2H2 Transcription Factor Family AT1G70790 58.015 3.39e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01077 - - zju:107429323 236.884