Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01072 ATGGGATCAAAAGATCCAAGCGAGAAGGCGCGGGTTTGGAGACCCAAGTTTAAGTTTAAGGCCCTACTCTGTTGCCCAAGAAGTTCATCAGCTACAGCAACACCTCCTCCTCCTCCGCAAGATTCAGCTTGCAGTTCCACTCATCAGTCAAACAGggaaggagttttggccttcaaggacaacgagaggcttcagaaaggggaacctatctctgctcagcttctgcaagccatcagagattcccgtgtttctatcattgtcttctcacgtgattatgctgcctccacatggtgcctcgatgaaatggctaccatagctcaatgcaagaaagagttcggacagacggttttctccgttttctatgacgtggatccttccgatgttcgaaagcagcgcggggtgtatgaggatgcttttcttttgcatacggagcggtttcaacaagatcttggcaaggttgaacgctggaagagagctatgacggatttggccaattctgctggatgggatgttagagataaaccagaattcacagagattgataaaatgattcaaaaaAATATCCCACACTTGGAAAAGATGGACTTGAGCTACTCAAAGGATCTCATAGAGACACCAAATTTTGAATGGAACCCAAACCTTAAGCGACTAGATTTTACAGGATGCACAAACTTGACGCATGTCCATCCCTCAATTGGACTTCTTAAGCAGCTTGGATACTTGAGTTTGCAAAACTGTAGCAGTTTGTTGAACCTCAATCTTGGCGATGATTGTAATTTAAGTTCTCTGAGAGTTCTACGCCTTTCTGGCTGCACGaaccttgggaagaccccagatttcacagggctttcaaatcttgagtaccttgattttggacattgtacaaatttaactacagttcatgaatctattggtgctcttgcaatgttgaagttcttgagtttgaggagctgcagaaatattgttgatatccccaaTGAAGTGAACAATATGATATCTCTTCAGACTCTAGATTTAAGAGAGTGTAAACTACTGATGTCTCCCCTTGGACAGATTTCTATGTCTTCCTCTTATCTAGGATGTTTGATATCTCTGGACCTTGGCTCATGCAATTTAATAGAAACTATTCCTGATTCTATTGGTGATTTGAGTTGCTTAGAAAGATTAAACTTGGAGGGAACTGTCCTAAGACGTCTACCTGGTACCATCAAGAAGCTTTCGAGGCTGGCATACTTGAATTTGGCATGTTGCGATTATCTTCAAGGATTACATGAGCTCCCATTTGATAGTGCACCATCAGGGGGAAGGTATTTTCAAACGGTATCTGCATCTCGTAACCATAGGTCAGGATTGTATGTTGTAAACAAATACAATATGCTTAGGATGAAATTATTTGATTGCATGCTGGCTGCTCTCTCATGGTTTGCAAGACTTGTTGAGCAACCTTGTCATTTCCGATGTGGGTTTGACATCATTATTCCTGGAAATAAGAGTGGTGGAATTCCAGGATGGTATTTCATTCATCAGTTTAAAGCTGGGTCAGCTGTAAGGGTAGTGGATTATGATGATGCAGATGACAACTGGCTTGGCGTTTCATTTTATGTTACATCTCAGTATGTTCTAGATAATTGTACTCCACCTGGACAGCTACGGCATCATTTTTATCTTTCTTTTGAAAGTGAGCACACAGAAGAACATTTTGATATGCCTTCTATAGTCGAACACCATCTGCATTCTGTACCTGGGGTAACACATGCTTGGATAATCTATGTCTCTCGGGTGCATTGCCATTTTGTGAAAACTGGAGCCCGTATAAGATTTAAAGCCTGCCAGGGATTGAAGTTGCAGAAATGGGGGTTTCGCATGGTGTTCAAACAAGATATAGAGGAACTGAAGAGGAGGTTAAAAAGTAAGGATATTAAAAAGCACAGTCCTATCTTTGATTCTTCCAGATTGGTCATTGAGACTGAGTATGTTGATGAAGACCCAAGTAGCAGTTCGGAGTCCAAGATCATGCTTCCTTATAATTGGTTGGTTACCGACGAAGAAGAAAATGAGAAGATGGAGGCAAAGGCCAAAGAAGATGATCTCTCTAATTTGGGCCTTATATAG 2112 0.3026 MGSKDPSEKARVWRPKFKFKALLCCPRSSSATATPPPPPQDSACSSTHQSNREGVLAFKDNERLQKGEPISAQLLQAIRDSRVSIIVFSRDYAASTWCLDEMATIAQCKKEFGQTVFSVFYDVDPSDVRKQRGVYEDAFLLHTERFQQDLGKVERWKRAMTDLANSAGWDVRDKPEFTEIDKMIQKNIPHLEKMDLSYSKDLIETPNFEWNPNLKRLDFTGCTNLTHVHPSIGLLKQLGYLSLQNCSSLLNLNLGDDCNLSSLRVLRLSGCTNLGKTPDFTGLSNLEYLDFGHCTNLTTVHESIGALAMLKFLSLRSCRNIVDIPNEVNNMISLQTLDLRECKLLMSPLGQISMSSSYLGCLISLDLGSCNLIETIPDSIGDLSCLERLNLEGTVLRRLPGTIKKLSRLAYLNLACCDYLQGLHELPFDSAPSGGRYFQTVSASRNHRSGLYVVNKYNMLRMKLFDCMLAALSWFARLVEQPCHFRCGFDIIIPGNKSGGIPGWYFIHQFKAGSAVRVVDYDDADDNWLGVSFYVTSQYVLDNCTPPGQLRHHFYLSFESEHTEEHFDMPSIVEHHLHSVPGVTHAWIIYVSRVHCHFVKTGARIRFKACQGLKLQKWGFRMVFKQDIEELKRRLKSKDIKKHSPIFDSSRLVIETEYVDEDPSSSSESKIMLPYNWLVTDEEENEKMEAKAKEDDLSNLGLI 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01072 703 SUPERFAMILY Toll/Interleukin receptor TIR domain 53 169 IPR035897 -
Aip08g01072 703 SUPERFAMILY L domain-like 177 453 - -
Aip08g01072 703 Gene3D - 44 197 IPR035897 -
Aip08g01072 703 Gene3D Ribonuclease Inhibitor 258 347 IPR032675 -
Aip08g01072 703 Gene3D Ribonuclease Inhibitor 348 449 IPR032675 -
Aip08g01072 703 Pfam TIR domain 51 184 IPR000157 GO:0007165
Aip08g01072 703 PANTHER TMV RESISTANCE PROTEIN N-LIKE 52 193 - -
Aip08g01072 703 SMART till_3 18 166 IPR000157 GO:0007165
Aip08g01072 703 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 52 193 - -
Aip08g01072 703 MobiDBLite consensus disorder prediction 27 48 - -
Aip08g01072 703 ProSiteProfiles TIR domain profile. 17 191 IPR000157 GO:0007165
Aip08g01072 703 Coils Coil 680 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01072 Aip-Chr8 14092982 14097335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01072 257 428 WRKY Transcription Factor Family AT4G12020 31.818 1.08e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01072 - - ahf:112707227 709.138