Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01071 agaaaggccttcaaaagtgatcgtcctagtagcagcacttgtatggagctaactcccatcatactggaatatgctcaaggtcttccattagcaatcaaagtagtgggttctttcttggacaaacggaatgcttcccaatggagggcttatttagaaagattgaagaaatatccggacaaaaaacttacagatgtgcttcaagtaagttttgaagacctgcaaaatgatgataaagaaatatttttgcacattgcttgcttttttagaggagacagggaagattatgtaaagcgaattctagctacttgcggactacaacctaacattggaattccagttctagaggagagatcactcataaccattaagaaccaagagattcatatgcatgacatgttacaagaattggggaagaaacttgttcgggaaagatatccagaagagccagcattatggagcagattatggCGGTGTAGCGATTTTGAAAATGCTCTGATGTCAGCTGAGACGggaacaaatcatgtcaaagccatagtcttagatcagagagaggagatgcccgggtgcagtcagttgaggatcagaggattgtcaaaattgagggatcttaaattgcttatattataccataaaaactttttaggaagccttgattttctttctcctaatctgcagtatcttgcttggcatggctatcctttcccttctttaccatcgtttcagccttacagcaggcttgttgaactgagcctgccttatagcaacgttaaacgactatgggaaggcaacaagAATATCCCACACTTGGAAAAGGTGGACTTGAGCTACTCAATGGATCTCATAGAGACACCAAATTTTGAATGGAATGCAAAACTTAAGCGACTAGATTTTACAGGATGCACAAACCTGATCCACATCCATCCCTCAATTGGACTTCTTAACCAGCTTGCATACTTGAGTTTGCAAAACTGTAGCAGTTTGTCAAACCTCAATCTTGGCGATGATTGTAATTTAAGTTCTCTTAGAGTTctatgcctttctggctgcacaaaccttaataagagtccagatttcacagggctttcaaatcttgagtacctcgatcttgaaaattgtacaagtttatcgacagttcatgaatctattggtgctcttgtaatgttaaagttcttgagtttgagaggctgtataattatttctatgcccaaAGAAGTCAACAATTTGATATCTCTTCAAACCCTAGATTTAAGCCGCTGTCTACGACTGAGGTATCCCCTCGGACAGATTTATTCATCTTACCTAGAATCTTTGATATCTCTGGACCTTGGCACATGCCATTTTATAGACAATattcctgattccattggagtgttgacttgtttagaaagattaaacttgaaggaatgtcagtgtagtcatttacctgataccatcaagaagctttccagactggcatatttgaatttggcggattgctcatatcttgaaagattgcctGAGCTCCCATTTGATAGTGCACCGTCAGGGGGAAGGTATTTTCAAACAGTATCTGCATCTCGTAACCATAGGTCGGGATTGTATGTTACAACCTACAATAAGGTTATGAAAAAAACCTTTAACTATATGCCGGCTGCGCTTTCATGGTTTGCTAGACTTGTTGAGCAACCTTGTCATTTTAGGTGTGGCTTTGACATTGTTATCCCCGGGAATGAAATTCCATCGTGGTATTTCAATCATCAATTTGAGGGCGGAACAGCAATAAGGATAGTGGACACAGATGTGGATGACAATTGCATTGGCTTTACCTTTTGTGTAGCATTTTGTGTAACCAATCCTTCGGCAGTTTCTAGTTCTTCACATAATCGGCTGTCCACATCGTTGCCAAGTCCATTATATCTTTCCTTTGAAAGTGAACAAGCAGAAGAAATCTTCTGTATGCCATGCCATTTAGACTGCAACCCTCAGTTTAAAACTGCGAGGAAGCAAAATTTTGATCATGTCTGGATTATCTATATTTCTCGGCCACACTGCCATTTTGTGAAAACAGGAGCCAATATCACATTTAAAGCCTGCCCAGGGATTGAAATGAAGAACTGGGGGCTGCAAATGGTATTCAAGCAACATATAGAGGCAATTAAAAGAAACTTGAAACGCCAAAGTAAGGTTGACCCTTTTTATTATCTTATGGATGACCCTGAAATCCAACTTCATGATTATAGGTTGGTTATTGAGGATGTGCATGAAAGCTACAACACTAGCATCGGGCCAAAAATCCAGCTTCCCTACAATTGTGAGGCCAACCACACACACCACAGGACCATCTTCCTTGAGCACATATGA 2340 0.2209 RKAFKSDRPSSSTCMELTPIILEYAQGLPLAIKVVGSFLDKRNASQWRAYLERLKKYPDKKLTDVLQVSFEDLQNDDKEIFLHIACFFRGDREDYVKRILATCGLQPNIGIPVLEERSLITIKNQEIHMHDMLQELGKKLVRERYPEEPALWSRLWRCSDFENALMSAETGTNHVKAIVLDQREEMPGCSQLRIRGLSKLRDLKLLILYHKNFLGSLDFLSPNLQYLAWHGYPFPSLPSFQPYSRLVELSLPYSNVKRLWEGNKNIPHLEKVDLSYSMDLIETPNFEWNAKLKRLDFTGCTNLIHIHPSIGLLNQLAYLSLQNCSSLSNLNLGDDCNLSSLRVLCLSGCTNLNKSPDFTGLSNLEYLDLENCTSLSTVHESIGALVMLKFLSLRGCIIISMPKEVNNLISLQTLDLSRCLRLRYPLGQIYSSYLESLISLDLGTCHFIDNIPDSIGVLTCLERLNLKECQCSHLPDTIKKLSRLAYLNLADCSYLERLPELPFDSAPSGGRYFQTVSASRNHRSGLYVTTYNKVMKKTFNYMPAALSWFARLVEQPCHFRCGFDIVIPGNEIPSWYFNHQFEGGTAIRIVDTDVDDNCIGFTFCVAFCVTNPSAVSSSSHNRLSTSLPSPLYLSFESEQAEEIFCMPCHLDCNPQFKTARKQNFDHVWIIYISRPHCHFVKTGANITFKACPGIEMKNWGLQMVFKQHIEAIKRNLKRQSKVDPFYYLMDDPEIQLHDYRLVIEDVHESYNTSIGPKIQLPYNCEANHTHHRTIFLEHI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01071 779 Gene3D - 3 74 IPR042197 -
Aip08g01071 779 PRINTS Disease resistance protein signature 25 39 - -
Aip08g01071 779 PRINTS Disease resistance protein signature 359 375 - -
Aip08g01071 779 Gene3D Ribonuclease Inhibitor 333 508 IPR032675 -
Aip08g01071 779 Gene3D Ribonuclease Inhibitor 188 332 IPR032675 -
Aip08g01071 779 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 2 353 - -
Aip08g01071 779 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 431 683 - -
Aip08g01071 779 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 351 427 - -
Aip08g01071 779 SUPERFAMILY L domain-like 129 507 - -
Aip08g01071 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 353 IPR044974 GO:0006952
Aip08g01071 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 84 IPR027417 -
Aip08g01071 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 431 683 IPR044974 GO:0006952
Aip08g01071 779 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 351 427 IPR044974 GO:0006952
Aip08g01071 779 Pfam C-JID domain 567 710 IPR045344 -
Aip08g01071 779 Pfam Leucine Rich Repeat 246 264 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01071 Aip-Chr8 14071952 14091760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01071 16 427 WRKY Transcription Factor Family AT5G45050 30.512 1.95e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01071 - - ahf:112707227 979.933