Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01069 ATGTCCCACCGAATACTTTTCATCACAATAATAACAAAGTCCCTTCTCGCGCCGTTGTTTAATCTCGGCAGCTCTCATTCAAAGAAACAATATACGGCGCTCTCATCTCCCTTCTATCTCTCCTTCGTCTCCGACAACGCCGTTCTTCCCTCTAGGGCTTCTCCTCTCTCCGCCGGTTACGATCTCTCCAGTGCTGTAGAGACGAAGATTCCGGCGAGAGGCAAGGATCTGGTGGCTACTAACCTCAGTGCATTTCAATTCCAGAAGGCACCTATGCCCGCATTGCTCCACGATCGGGTCTTCCTCGACGATCTCAGAAAATTGCTCGAATTCGACTCGACGGTTAACATTCTCGTTAACTTGGCCGGTGTTCTTGATAGCAAGTACTCGACCATAGCCAACATTGCAGTGGAGGATTTTGATCACATTTTCAGATGCGCCTATTCTGGTTCTCTTACAAGTGGAGTAGGAATGCCAATACAAAGTGCAATTTTGGGGAAACCATCAGAATTTTCATTAAGAAGATACGATCTAGTGAGATTCATGAAGATAATACAAAAAGCTGGTCTCTATGCTCATCTTCGCATTGGTCCTTATGTCTGTGCTGAATGGAACTTCGAGTACAATACGTTCTCCCCCGATACGGTGAACAAGATGCCTAGAACAGATCTCGTTGAGGAGATTTTTAGACTACAAGCTGCACTGGGTGAGCAGACACAAGTTACAAAGTTTAGCCAAGAGGAGTATGAAAGGCTTCAAAATTCATGA 768 0.4544 MSHRILFITIITKSLLAPLFNLGSSHSKKQYTALSSPFYLSFVSDNAVLPSRASPLSAGYDLSSAVETKIPARGKDLVATNLSAFQFQKAPMPALLHDRVFLDDLRKLLEFDSTVNILVNLAGVLDSKYSTIANIAVEDFDHIFRCAYSGSLTSGVGMPIQSAILGKPSEFSLRRYDLVRFMKIIQKAGLYAHLRIGPYVCAEWNFEYNTFSPDTVNKMPRTDLVEEIFRLQAALGEQTQVTKFSQEEYERLQNS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01069 255 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 207 254 - -
Aip08g01069 255 Gene3D Glycosidases 164 240 - -
Aip08g01069 255 Gene3D - 38 144 IPR036157 -
Aip08g01069 255 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 207 254 - -
Aip08g01069 255 SUPERFAMILY (Trans)glycosidases 176 207 IPR017853 -
Aip08g01069 255 SUPERFAMILY dUTPase-like 37 84 IPR036157 -
Aip08g01069 255 Pfam Glycosyl hydrolases family 35 175 206 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01069 Aip-Chr8 14008566 14013382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01069 208 254 C3H Transcription Factor Family AT1G73950 68.000 6.21e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01069 - - ahf:112772513 306.605