Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01066 ATGGAGCCAGGCGAGACGCCATCAGTTTCTACTAATGCTAGTTGGTCATGGACGGTGTGCCTTTTCATATCAGGTATAGTTTTTGGTTCATTCATATCAGGCATCTTTCTCAATTTGAGACCCTTACTCAGCAGCAAGTTCCGGGCTCTGCTGGGTTACCAAGATTCAGATTCCAACAACATCAACGATGAACCGTTGGGCGAGGAAGGCAGCAGGTTGAGCCAGGAAGATTCAGCTTCTCTTCATTCTCTGGATTCAAATGTCAGCCAAGGCAGCTCCCTGAGCCAGCAGGAAGATTCAACTTGCGATCATCCTCCTCCGGAGTCAAAGTCAACTATGACCGAGGGGAGTTCGTCTTCTCCGCGAGatccacgtgatgttcgatatcaaagtggggcttacgaggatgcgtttgattcgcatagggagagattcaaagaagaGCCTGACAAGATCTACAAATGGAAGAGTGCTATGACGTATTTGGCCAATTTAAGTGGTTTTGCTTTAAGAGATCCCGCTGAAGCCGAAGGGATTGAAAGAATAGTTGAGGCCGTGCTGGACACACTGgaattcaaacaagatCCCCTCAAGGTTCAAAAGTGGAGGGAAGCTTTGAATTACTTGACTAATCTACAAGGTGTGAGTCTAAAAGATGGatcagagattgaagcgattggaaatatcattcagatagtggaacgattatgccctaaattctccaggcttagtagccacggtccagttgaaaatccagcatcgcggagtagattgtggcgttacgaggactttagctttaccttgaagtcaaagaatGAAGCAAGCAAAGTTAAAGCCATAGTTCTATATGAGGATGCCTCCATCTCCAAACATGAAGATCTGAACATCGAAGGGTTGTCAAAAATGACAAATCTTGAACTGCTCATAGTATATCATCAACATTTTTCGGGAAAGCCTACTTCTCTTCCCAACAAATTACGGTATCTTTTGTGGGATGGATATCCTTCCTCTTCTTTGCCTTCATTTGAACCGTATAACCGTCTTGTTCAATTGAATTTGCCTAACAGCCGCATCAAACGGCTATGGAATGGCAGTCAGGTATTTCGAAGTTTAGAAAGGGTGGATTTGAGTTACTCAAAAGAGCTCAAGGAGACGCCAAATTTTGAAGGGTGCCCAAGTCTTAAGCGGCTAGATCTCACAGGATGCACAAACCTAGTGCAAGTCCATCCATCTATCAGAGATCTTAAAGAACTTGCTTACTTGAGTTTCCGTGACTGTGATAAGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGAGCTTTGGAATCATCCGAGACTACTGGCGGATAATGTGGACTACCCGTGGACGGTTACATGCATATACAACACACTGCATCATGGACCGGGTAGAGTTGCAAAAAAGGAAAAACCAAAAAACCAAAGAGGTTCTAAGGATTGGGCCAGGACCAAAGGCAAGGGGTTGGGAACTAAATCCAATGGGCTGGCCCTCTCCACTTTGGCTACTGGACCCGACCCAGATTGGAAGGGGGAATCGGAGCTGGCTCTCATCTTCGTTCCTCCTGCGCAGCAACGCAATGCTTCCTATGGAGAGAGCGGCAGCGAAGAGGATGGTCGCACCCGACTAGGAGACGGCACCAGCGGGAGTCGGCGGCCAGGATCTCGAGGAAATCGCCTGGTGCGCAGAGAGGAAGGCCGCGATCGAACTGTTGGAGGCGCCGGGGATGTCGAGGATGGTGGGGTAGGTCTTGTCGCTGGCGCTGCGTTCTTGTTCGGTCGGGCCGATGACAGTGAGGAGCATCGAGTTGCGACACGGATGGTGATGGGACCAAGGGAAAATCCGGGCAGTCACAATGCGATGGTGAGGGACGAGCTGACTATGTTAGAAGGGCTTCCTCAGGAGATTGTTGCTGCTGGAACGTACAGGGAGCCAGCTGCTAACAATGGTCAACCGGGAACAACTCAAACAAGCCTTTGTGAACAGAATGGCGGTAGTAGGGCGGATGGACTTGCTGGGGTAGACTCCGGAGATGTGACGTCTTCCATTGTCGCCGTCGCCGCTGTCGTCGCCCCCGCGGCTCGCGTCGCACGAGCTCCCTCCATCGCCCTCATCGCGTTTGCTCCCTTCGTTGCCGTCGTCGTACGAGCTCTCTCCGCCGTGCTCTTGTCTTACGAGCTCCTTCCAGCGCCGCTCTCGTCGTTGCTTCTTCTCTCCTCGCTGGAGGTTTGTCATCATCTCTTCTCGTCGCCGTTAGTTCAGGTTCTTCGTGATCTTCTTGAGTTCAAAAGTGATCGTGCTCCAATACCTGCAGGGAAGGTTGAACCTGCTTCAGCTATTGTGCAACGGTTCTGCACTGGTGGGATGTCTCTTGGAGCTATTTCAAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGTAATACAATTTGAAGGTCCAAGAGAAAGGTATGTCTTCACTAGAGGAGGGTTTGTGGAACTGTCCAAAAAGCTTTCTCTACCTCTAGGTTCCACTCTTGACAGATATGAGGGTCTGGTTCTTTCTGTTGGTAGAAATGGAAGATCCTATGTATTAATTCTCGAGGCTGGTCCATTGGCGGATCCAAGAGGGTCAAATAATAATGCTTTTCAGATGCAAGCGGAGATTCAATTGCTTTCGCCACTCGTTCCTGTTCGTCAATTGAGCTTCCTCAAGTTGCTGGTCCATCATGGGCACCCTTTGCTTCTTGGATCACTGATTACTTGGGTTGAGCATTCCCAATATGATGAGAGTCTCATTCACCAACTATATCGGCCGTTGATTGCTGTTGAGGAATCTAATGGGAATAAGGATGCTATGGACATTGAGATTCGTTCAAGAGGGAATGTGGTGGGGAAACTAGTAAGAACAAAGCACCATAAGGAAATTATTTTCCCTTTGGTGATCAACTCTTCTGAATCAAACCTATCAGGTTCAGAAGAATTCATGCACATATGGCTGATGGATGTTGATTCATGTCCATTTTTTGAGAAAAAATTCAGTTAA 3099 0.4427 MEPGETPSVSTNASWSWTVCLFISGIVFGSFISGIFLNLRPLLSSKFRALLGYQDSDSNNINDEPLGEEGSRLSQEDSASLHSLDSNVSQGSSLSQQEDSTCDHPPPESKSTMTEGSSSSPRDPRDVRYQSGAYEDAFDSHRERFKEEPDKIYKWKSAMTYLANLSGFALRDPAEAEGIERIVEAVLDTLEFKQDPLKVQKWREALNYLTNLQGVSLKDGSEIEAIGNIIQIVERLCPKFSRLSSHGPVENPASRSRLWRYEDFSFTLKSKNEASKVKAIVLYEDASISKHEDLNIEGLSKMTNLELLIVYHQHFSGKPTSLPNKLRYLLWDGYPSSSLPSFEPYNRLVQLNLPNSRIKRLWNGSQVFRSLERVDLSYSKELKETPNFEGCPSLKRLDLTGCTNLVQVHPSIRDLKELAYLSFRDCDKLVTLNLDHKCKLSSLKELWNHPRLLADNVDYPWTVTCIYNTLHHGPGRVAKKEKPKNQRGSKDWARTKGKGLGTKSNGLALSTLATGPDPDWKGESELALIFVPPAQQRNASYGESGSEEDGRTRLGDGTSGSRRPGSRGNRLVRREEGRDRTVGGAGDVEDGGVGLVAGAAFLFGRADDSEEHRVATRMVMGPRENPGSHNAMVRDELTMLEGLPQEIVAAGTYREPAANNGQPGTTQTSLCEQNGGSRADGLAGVDSGDVTSSIVAVAAVVAPAARVARAPSIALIAFAPFVAVVVRALSAVLLSYELLPAPLSSLLLLSSLEVCHHLFSSPLVQVLRDLLEFKSDRAPIPAGKVEPASAIVQRFCTGGMSLGAISRETHEAIAIAMNRLGGKSNSGEGGEVIQFEGPRERYVFTRGGFVELSKKLSLPLGSTLDRYEGLVLSVGRNGRSYVLILEAGPLADPRGSNNNAFQMQAEIQLLSPLVPVRQLSFLKLLVHHGHPLLLGSLITWVEHSQYDESLIHQLYRPLIAVEESNGNKDAMDIEIRSRGNVVGKLVRTKHHKEIIFPLVINSSESNLSGSEEFMHIWLMDVDSCPFFEKKFS 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01066 1032 Gene3D - 121 195 IPR035897 -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 57 128 - -
Aip08g01066 1032 Pfam Conserved region in glutamate synthase 764 832 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aip08g01066 1032 SUPERFAMILY L domain-like 285 447 - -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 658 675 - -
Aip08g01066 1032 Gene3D Aldolase class I 750 895 IPR013785 -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 655 678 - -
Aip08g01066 1032 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 757 833 - -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 538 587 - -
Aip08g01066 1032 SUPERFAMILY FMN-linked oxidoreductases 764 833 - -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 73 125 - -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 474 516 - -
Aip08g01066 1032 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 757 833 - -
Aip08g01066 1032 Gene3D Ribonuclease Inhibitor 282 454 IPR032675 -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 474 497 - -
Aip08g01066 1032 MobiDBLite consensus disorder prediction 568 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01066 Aip-Chr8 13845972 13863922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01066 250 452 WRKY Transcription Factor Family AT4G12020 34.071 5.12e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01066 - - aip:107613207 398.667