Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01051 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACATAGAGGACCAGGAGAACGAGCCCGAGCCCGCATCAGAAGCCGGGCCTGCTTCTCCTTCCTCAGGTGATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGAGCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGAGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCGGCGAGGAAGCAAGTTGAACGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACAACTACGAACACAACCACTCTCTTGAGTCCGCCGCTGGCTTCCCGCCGGAGGATCTGACGGTATTCTCGAGCCACGTCGATCTCGACCTCTCCGGCGACTCCGCAGTACTTCTCAGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCAGCCGGCGGCGTCCTGGAGAGTCCGATCTGTGGCTGCGTTGATGACATGGCGCTGACGGCGGAGGAGGAGGACGGGGAAGAGTCGCTTTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGCGAAGGAATATTCCAAGCGCCAGCGCGATCCAGTGCGGTGGCATCACAGGATAA 732 0.5751 MYRRINTRPLYVADIEDQENEPEPASEAGPASPSSGDDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKSKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYNYEHNHSLESAAGFPPEDLTVFSSHVDLDLSGDSAVLLSHHNHHGFGWFDDVASAGGVLESPICGCVDDMALTAEEEDGEESLFAGLGELPECSAVFRRRNIPSASAIQCGGITG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01051 243 PANTHER OS01G0750100 PROTEIN 165 238 - -
Aip08g01051 243 PANTHER OS01G0750100 PROTEIN 21 135 - -
Aip08g01051 243 MobiDBLite consensus disorder prediction 1 78 - -
Aip08g01051 243 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 165 238 IPR044810 GO:0003700
Aip08g01051 243 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 135 IPR044810 GO:0003700
Aip08g01051 243 SMART WRKY_cls 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g01051 243 SUPERFAMILY WRKY DNA-binding domain 72 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g01051 243 Pfam WRKY DNA -binding domain 78 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g01051 243 Gene3D WRKY domain 64 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g01051 243 ProSiteProfiles WRKY domain profile. 77 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01051 Aip-Chr8 13483838 13486752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01051 1 230 WRKY Transcription Factor Family AT3G58710 47.287 1.56e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip08g01051 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01051 - - ahf:112707218 454.907