Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01041 ATGGCTCAGACACCACTTCATGTTGCTGCCGGTCAAAATAGGGCTGACATAGTTAAATTTCTGCTCGAGTGGCAACGACCAGATAAAGTTGAGTTGGAGGCAAAGAACATGATAGCAAAAAATGGATGCAACAAAGCTGCAAAGTTACTTCTGGCCCACGGGGCTGTTGTTGAAGCCCAAGCAAATAATGGTATGACTCCTCTACACCTTGCTGTTTGGGTGGAAAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTTTTGTTGGCTCAACATTATGACAGACGAGGCCAATATAAAGTTGCTCTTTCCAAAATTGACGAGGCCATAGAACACACACCTACCGTTATTGATCTATATTCTGTCAAGGCTATGGCATTAACAGTGGTATCTATCGGTGTTGCTGTGGCTACGATGACTGATCTGCAATTCCATTTTTTTGCAGCAAGAGAACTAGACAGCTTTGTCTCTGATGTAGAAAATAACACCTATTACGTTGATTTTCCTGGCTGCTATGATGCCCTACTTAGACCCTCCGGGTGTCCTCTCCTTTGGTTGGAACTTCAGAAACACACCCGTGATTTTTGGCTCGGCAATTCTTGGATTCTTGCTTCAGTGGTCTGGTGCTTTAGCATTAGGGATTCAGAAAGAGGAAGCCAAAATCGTTGCATGGGAAAGCCAACAGAAGGCAAAGTAACTTATTGTTGCTTTTGTACAATTCAAGGTAGGAAACTAGTTTCTGATCATTGCTTCCATTTGGTGACAGGTCCTGACAGAAGGATCTTCTTGCCAAAGGGTCTCTTGTATGATCTAAGGGAAGGAGGATTCAGAAAGAGGAAGCCAAAATCGTTGCATGGGAAAGCCAACAGAAGGCAAAGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCGAGATCCTACCATACTTGAATGGAGAAGTGCCCGGAGACTATAGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAACTACTTGGAACTTCTCGCAAATGCCTTGGACCGTGAAAATTGGTCACTGGTTCAATTTCTCATGTCATCTTCTTACAGTGGATATGGCACCTCCAGCTTTCAACAAGTAAACAAGTTCACAAATGTTCCAGAAATAATTATGTATGATCTAAGAGAAGGAGaTTGGGGGACTAAAGGAGCTGTTACTCCTGTCAAGGACCAAGGATTTTGTGGTAAGATGTCGGAGCTAGAAGTGGTTGTGACATACATGGTAGAGATTTGGGATGTGCCAGTGGTTACATGGAAGCCGTCGTCCAGCATAAACACACCAATCTCAACAATGTGGATGATATTCGTTAACAACCAGATTCAAAGCTTGAGCGTTAGAATTGGAGGTCCTGAAGAACACCTTGGAGAAGCAACAATTGGAAGCACGTTTAGAGTAAGAACTTTCCCATCACAACTTCCTCTCCCGCGCACCGCAACAATCACCGACCATGCAAGGGCAGCTGCCGTTCGTCCTCTTCTCTCTTGCGTCGCGCCATCACAACTTCCTCCCCCGCGTGCCGCAGCAACCATCGACCATGCAAGTGAAAATGCTTATGTACTTCTATAA 1608 0.449 MAQTPLHVAAGQNRADIVKFLLEWQRPDKVELEAKNMIAKNGCNKAAKLLLAHGAVVEAQANNGMTPLHLAVWVEKEPPSTLMWTLFLLAQHYDRRGQYKVALSKIDEAIEHTPTVIDLYSVKAMALTVVSIGVAVATMTDLQFHFFAARELDSFVSDVENNTYYVDFPGCYDALLRPSGCPLLWLELQKHTRDFWLGNSWILASVVWCFSIRDSERGSQNRCMGKPTEGKVTYCCFCTIQGRKLVSDHCFHLVTGPDRRIFLPKGLLYDLREGGFRKRKPKSLHGKANRRQSPDRRIFLPEGLLDRSEILPYLNGEVPGDYSYDPFGLSKKPEDFANYLELLANALDRENWSLVQFLMSSSYSGYGTSSFQQVNKFTNVPEIIMYDLREGDWGTKGAVTPVKDQGFCGKMSELEVVVTYMVEIWDVPVVTWKPSSSINTPISTMWMIFVNNQIQSLSVRIGGPEEHLGEATIGSTFRVRTFPSQLPLPRTATITDHARAAAVRPLLSCVAPSQLPPPRAAATIDHASENAYVLL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01041 535 SUPERFAMILY Chlorophyll a-b binding protein 312 341 - -
Aip08g01041 535 Gene3D - 40 130 - -
Aip08g01041 535 Pfam Ankyrin repeats (3 copies) 6 73 IPR002110 GO:0005515
Aip08g01041 535 Pfam N-terminal acetyltransferase A, auxiliary subunit 62 125 IPR021183 -
Aip08g01041 535 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN / ANKYRIN REPEAT FAMILY PROTEIN 1 74 - -
Aip08g01041 535 Pfam Protein of unknown function (DUF1749) 338 373 IPR013744 -
Aip08g01041 535 PANTHER PROTEIN CFXQ HOMOLOG 1 74 - -
Aip08g01041 535 SUPERFAMILY Ankyrin repeat 3 75 IPR036770 -
Aip08g01041 535 Gene3D Chlorophyll a/b binding protein domain 298 342 - -
Aip08g01041 535 ProSiteProfiles Ankyrin repeat region circular profile. 1 23 - -
Aip08g01041 535 ProSiteProfiles Ankyrin repeat profile. 1 23 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01041 Aip-Chr8 13311408 13326759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01041 293 369 Chloroplast and Mitochondria Gene Families AT4G10340 55.000 3.64e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01041 - - aip:107618345 121.324