Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01027 ATGGAGGAGACACGAGAAGATGCAGGCCCGTCAGAGCAAGGTCCATCTAATGTTTCATGGTGGCCGTCTGATTTCGTTGAAAAATTTGGATCTGTTTCATTGGGTTCTCAAGAGGAGGCCTTAAACAATAAAGAATCCCCTAGACATTCTGGTAATGATATTTTGTCACCTAAAAATGCATCTCAAGTTCTCTGGAGCACAGGAATTCTACAAGAGCCAATTCCAAATGGATTTTATTCAATCATTCCGGACACAAGACTCAGAGAACGTTTTGATAGTATTCCTACCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAGGGTTGATATCATTCTTGTGGATTCAGAAAGAGATAAAAAGCTGTCCATGTTAAAGCAACTGATTGTGGCATTAGTTAAAGGATTAAATTCGAATCCAGCTGCAGTTATTAAGAAGATAGCTGGATTAGTTACTGATTTTTATAAGAGACCCAATGTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACCTGCCACTTGTTTGAAAATCGAGGTGTCCAGATGCTTGGGCAAATTAAACATGGTTCATGCCGTCCTCGAGCTATCTTATTCAAAGCATTAGCTGATACTGTAGGTCTTGAAAGTAGGCTTGTGGTGGGCTTGCCAAATGATGGGACTGTTGAATGCATAGACTCATACAAACACATGTCTGTGATTGTTGAATTGAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGCCAATTGTTACCACGATCAACCAAGGCAGTTATTATGACTCATATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCCTTATATGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTTCACAGAAGATTTGAAGCTTCTTCGAATGCATCAGGCCGATCCTTACGTAACATGATGTTACGATCAAACAGTTGTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAAGCCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGGGCGCGTGCACGGTCCCTGCTAAGTGGTGATAGGACAGCATTTAGAGATTTTGCTGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGATGGTGCATCCTCATCAGAACCACGTCGGCCACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATTGTTAGGGCTGTGCGGGCAATGAATGAAACCTTGAAGCAAAAACGGGGGGATGATAATTCATTCTCCCATTCTCGAAACAATCAAATTAATGAAGCAAATCTTCAGCAAAATGTGTCAAATTTTCATCTTGATGGTCATGTCCATGTAAATTCACAAAAGGCAATGTCATTACCGTCTTCCCCACATGAATATCGAGGTCAGTCTTCTGAGAGAAGTGGGCCATCAAGACGTGACGTGAACCATGAGCTGGAGTCAACTTGGAATAAAGTCCTTGAATCTCCAATGTTCAACAATAAGCCTCTTGAAGAAATAGTTGCTTGCTTGGCCATCAATGTAGTTTTTCTTTTTCCAGGGTTTTTTGGGGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTGGAGCAAGATTTAACTGCTGAGAACATGGAAGACTTTTGCAATGAGATTTCAATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTCGGTGCTTGCACCAAGCCTCCTCATCTGTCAATGGTTACGGAATACATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAAAACAAAAAGCTTAGCTGGCGGCGAAGATTAAAGATGTTGCGTGACATATGTAGGCAAGTAGGGTTGATGTGCATTCACCGTATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAACTGTCTAGTGAACAAGCATTGGACCGTCAAGATATGTGATTTTGGGCTTTCAAGAATAATGACAGAATCTCCCATGCAAGATCCCTCATCCGCTGGAACTCCGGAATGGATGGCCCCTGAACTCATCCGAAATGAACCGTTCACCGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATTTGGGAGCTCTGTACCTTGAGCAGACCATGGGAAGGTGTACCACCTGAGAGGGTGGTTTATTCGGTTGCTAACGAGGGTTCTAGATTGGAGATTCCTGAAGGCCCCCTAGGCAGGCTGATTTCAGACTGTTGGGCAGAGTCACATGAACGGCCAAGTTGTGAGGAGATTCTTTCACGCTTGTTGGACATCGAGTACTCAATGTGCTGA 2379 0.4309 MEETREDAGPSEQGPSNVSWWPSDFVEKFGSVSLGSQEEALNNKESPRHSGNDILSPKNASQVLWSTGILQEPIPNGFYSIIPDTRLRERFDSIPTLDELHALSGEGFRVDIILVDSERDKKLSMLKQLIVALVKGLNSNPAAVIKKIAGLVTDFYKRPNVESPAKAALDETCHLFENRGVQMLGQIKHGSCRPRAILFKALADTVGLESRLVVGLPNDGTVECIDSYKHMSVIVELNSVEMLVDLMRFPGQLLPRSTKAVIMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKEENLQFHRRFEASSNASGRSLRNMMLRSNSCLSLSHSEPNIATAFGRRSRRKAIAEQRTASSSPEHPSFRARARSLLSGDRTAFRDFADDQATSRSSYRSDGASSSEPRRPRRRSISITPEIGDDIVRAVRAMNETLKQKRGDDNSFSHSRNNQINEANLQQNVSNFHLDGHVHVNSQKAMSLPSSPHEYRGQSSERSGPSRRDVNHELESTWNKVLESPMFNNKPLEEIVACLAINVVFLFPGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPHLSMVTEYMEMGSLYYLIHLSGQNKKLSWRRRLKMLRDICRQVGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMQDPSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIIWELCTLSRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISDCWAESHERPSCEEILSRLLDIEYSMC 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01027 792 MobiDBLite consensus disorder prediction 478 504 - -
Aip08g01027 792 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 790 - -
Aip08g01027 792 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Aip08g01027 792 MobiDBLite consensus disorder prediction 381 420 - -
Aip08g01027 792 Pfam Protein tyrosine and serine/threonine kinase 543 784 IPR001245 GO:0004672|GO:0006468
Aip08g01027 792 Gene3D Transferase(Phosphotransferase) domain 1 613 791 - -
Aip08g01027 792 MobiDBLite consensus disorder prediction 342 369 - -
Aip08g01027 792 MobiDBLite consensus disorder prediction 36 55 - -
Aip08g01027 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Aip08g01027 792 SUPERFAMILY Protein kinase-like (PK-like) 542 784 IPR011009 -
Aip08g01027 792 MobiDBLite consensus disorder prediction 404 418 - -
Aip08g01027 792 MobiDBLite consensus disorder prediction 388 403 - -
Aip08g01027 792 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 790 - -
Aip08g01027 792 MobiDBLite consensus disorder prediction 1 21 - -
Aip08g01027 792 SMART serkin_6 539 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01027 792 CDD STKc_MAP3K-like 543 784 - -
Aip08g01027 792 Gene3D Phosphorylase Kinase; domain 1 540 612 - -
Aip08g01027 792 ProSiteProfiles Protein kinase domain profile. 534 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01027 792 MobiDBLite consensus disorder prediction 478 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01027 Aip-Chr8 12857693 12866809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01027 1 792 MAP Kinase Kinase Kinase AT3G58640 67.633 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Aip08g01027 PK_Tyr_Ser-Thr 2.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01027 - - aprc:113853840 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01027 08 12857693 12866809 Aip08g01027 08 12857693 12866809 ECH