Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01024 ATGGGATCCCCCGCTGAAGCACCATCTCCTGATGCCGCACCCGCATCATCTCCTCCTCCTCCTCCGCCGCCGACGACTCGGCCCTCACCGTTCCCCGGACGGGAAGACTGCTGGTCGGAGGAGGCCACCTCCACCCTCATCGACGCATGGGGTTCCCGTTACCTCTCCCTCAGCCGCGGCAGTCTCCGCCAAAATCACTGGCAGGAAGTCGCCGCTGCCGTCAACGCCGCCCACGGCCACGACCCGAGACACCGCCGCACCGATGTCCAGTGCAAGAACCGCATCGACACCCTCAAAAAGAAGTACAAGGTCGAGAGGGCTAGGGTTTCCGATTCCACCGCCGGCGACGATGACGGCGACGGACGCGTATACTCCGGCACATGGGCTTTCTTCCACCGCATCGATTCTCTCATCGGAGACACGTATCCTTTGAAAAAGCAGTCCCCGCCGGTGAAATCCTCACCTCGCCTTAAATCCCCTCCGGCGGCGAAGCCTTCGCCGCCGCCGTGGACGGTGACTCCGGTAGGTCCCCGATCCGGAACAAAGAAGCGACCTGCGCCGATGAGTTCCGATGACACTTATTTTCGCCGGAAGTTCTCGGCTTTTGCGGCCGCCGCGGTGGCGGCGGCTGCGGCGGAGAGTGAAGATTCAAAGGGGAGCAGCGAGAAGAGGAGAAGGGTAACAAAAAACGATGAAGAATGGGAAATTGGGTACCGAGAATTGGCACATGCTATTGAGAAAGTTGGTGAGATATATGAGAGAGTTGAAGCGGCGAAGAGGAAGCAAATGGTTGAATTGGAGAAACAAAGGATGCAGTTTGCTAAGGATTTGGAGTGTCAGAGGTTGAAGCTGTTCATGGAGACTCAGCTTCACATACACAAGATCAATAATCACTCTTCTAATGATGCTGCTGATAGTTTCTCATAG 927 0.5707 MGSPAEAPSPDAAPASSPPPPPPPTTRPSPFPGREDCWSEEATSTLIDAWGSRYLSLSRGSLRQNHWQEVAAAVNAAHGHDPRHRRTDVQCKNRIDTLKKKYKVERARVSDSTAGDDDGDGRVYSGTWAFFHRIDSLIGDTYPLKKQSPPVKSSPRLKSPPAAKPSPPPWTVTPVGPRSGTKKRPAPMSSDDTYFRRKFSAFAAAAVAAAAAESEDSKGSSEKRRRVTKNDEEWEIGYRELAHAIEKVGEIYERVEAAKRKQMVELEKQRMQFAKDLECQRLKLFMETQLHIHKINNHSSNDAADSFS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01024 308 Pfam Myb/SANT-like DNA-binding domain 35 137 IPR044822 -
Aip08g01024 308 MobiDBLite consensus disorder prediction 216 230 - -
Aip08g01024 308 MobiDBLite consensus disorder prediction 11 30 - -
Aip08g01024 308 MobiDBLite consensus disorder prediction 142 190 - -
Aip08g01024 308 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 305 IPR044823 -
Aip08g01024 308 MobiDBLite consensus disorder prediction 154 174 - -
Aip08g01024 308 MobiDBLite consensus disorder prediction 1 38 - -
Aip08g01024 308 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 305 - -
Aip08g01024 308 MobiDBLite consensus disorder prediction 211 230 - -
Aip08g01024 308 Gene3D - 38 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01024 Aip-Chr8 12810069 12812817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01024 238 298 Trihelix Transcription Factor Family AT3G14180 49.180 2.89e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aip08g01024 Myb_DNA-bind_4 3.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01024 - - gmx:100811154 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01024 08 12810069 12812817 Aip08g01024 08 12810069 12812817 ECH