Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00979 ATGGCGCAATTGCCTCCCAAGATTCCAAATATGTCGCCAACCTGGCCGGACTTCCCTTCCCCTCAGAAAATGCCACCGCCGTCTCTCAATGCAAGCCAATATCAGCTTCCTCAGAACCCGTCCTGGGTGGACGAGTTCCTAGACTTCTCCTCTGCCAGACGAGGCGCGCATCGCAGGTCGGTGAGCGACTCGATCACCTTCCTGGAGGTGCCGTTGCTGGCAGGGGAAAATTGTCGCGGGGACGGTGCCGTCCCCCCAAGGGATAATGAGGAGAGTGAATTCGAAAAGTTCGACGATGAACAATTCATGTCGATGTTCACGGACGAGATTGCTAATGGTGGGGGTATTCCGATGCCGCCAACGATGTCGTCTTCAAACACTACAAGCGACGAGAAAGAAACGAGTTACCAGAATGAGGTTAATGTGAAGAAGAATTCGAAGGATGAGCAAGAACAGGAAATGAAATTGAATTTGAAGAATGAAGCAGATGAGGTTGAAAGCCAATGTAAAGTGGAAGAAGAAAGTAATAATGCGCTGCCTTCAAACAACACCAACAATCTTGCTTCTTCCAATGACCGAATTACTGATCCCAAGAGAGTCAAAAGAATTTTGGCAAATAGACAATCTGCACAAAGATCGAGAGTGAGAAAGCTGCAATACATATCAGAATTAGAGAGGAGTGTAACTTCATTACAGGCGGAAGTTTCAGTGCTGTCACCACGGGTTGCATTCTTAGATCATCAGCGTTTGCTTCTAAATGTTGACAATAGTGCTATTAAGCAAAGAATCGCCGCCCTTGCCCAAGACAAGATTTTCAAAGATGCTCATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAGAACCTTCAGAAGATGGAAAACAATAACAATGCACCATGCTCATCACCGTTACGAGCGTCGCCGCCGTCGCCATCGCCGTCGCCAAGGCAGAATGAACAGATTCTCAATGTTTGA 996 0.4739 MAQLPPKIPNMSPTWPDFPSPQKMPPPSLNASQYQLPQNPSWVDEFLDFSSARRGAHRRSVSDSITFLEVPLLAGENCRGDGAVPPRDNEESEFEKFDDEQFMSMFTDEIANGGGIPMPPTMSSSNTTSDEKETSYQNEVNVKKNSKDEQEQEMKLNLKNEADEVESQCKVEEESNNALPSNNTNNLASSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSAIKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLQKMENNNNAPCSSPLRASPPSPSPSPRQNEQILNV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00979 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 201 216 IPR004827 GO:0003700|GO:0006355
Aip08g00979 331 MobiDBLite consensus disorder prediction 118 135 - -
Aip08g00979 331 MobiDBLite consensus disorder prediction 172 193 - -
Aip08g00979 331 CDD bZIP_plant_RF2 199 249 IPR044759 GO:0003700|GO:0006355
Aip08g00979 331 SUPERFAMILY Leucine zipper domain 198 252 IPR046347 GO:0003700|GO:0006355
Aip08g00979 331 MobiDBLite consensus disorder prediction 83 99 - -
Aip08g00979 331 SMART brlzneu 194 258 IPR004827 GO:0003700|GO:0006355
Aip08g00979 331 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 310 - -
Aip08g00979 331 MobiDBLite consensus disorder prediction 298 331 - -
Aip08g00979 331 Pfam bZIP transcription factor 198 242 IPR004827 GO:0003700|GO:0006355
Aip08g00979 331 MobiDBLite consensus disorder prediction 78 99 - -
Aip08g00979 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 196 248 IPR004827 GO:0003700|GO:0006355
Aip08g00979 331 MobiDBLite consensus disorder prediction 1 36 - -
Aip08g00979 331 Gene3D - 197 250 - -
Aip08g00979 331 MobiDBLite consensus disorder prediction 1 26 - -
Aip08g00979 331 MobiDBLite consensus disorder prediction 111 197 - -
Aip08g00979 331 Coils Coil 148 175 - -
Aip08g00979 331 Coils Coil 277 297 - -
Aip08g00979 331 PANTHER BASIC LEUCINE ZIPPER 34 1 310 - -
Aip08g00979 331 MobiDBLite consensus disorder prediction 136 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00979 Aip-Chr8 11465925 11469245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00979 1 275 bZIP Transcription Factor Family AT3G58120 56.623 8.25e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip08g00979 bZIP_1 3.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00979 - - gmx:100815433 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00979 08 11465925 11469245 Aip08g00979 08 11465925 11469245 ECH