Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00966 ATGGATGATGGAGAAGTTTCAAATGGTGCTTTCCCTCTTCATCACAACAACCAAACTCATGATCCAACTTCTAACAATCCTCCACCTTTGAAAAGGAAGAGAAACCTACCTGGAAACCCAGATCCTGAAGCTGAAGTGATAGCCTTGTCACCCAAGACTCTGATGGCGACAAACAGGTTCGTGTGCGAGATTTGCCTAAAGGGTTTCCAAAGGGATCAGAATCTTCAACTCCATAGAAGAGGACACAACCTTCCATGGAAGCTGAAGCAGAGAACAACAAAAGAAGTAAGGAAGAGAGTGTACGTGTGCCCGGAGAAAACCTGCGTCCATAACCACCCTTCAAGGGCCTTAGGAGACTTAACAGGGATCAAGAAGCACTTCTGCAGAAAGCATGGCGAGAAGAAGTGGAAGTGTGACAAGTGCTCAAAGCGTTATGCTGTACAATCAGATTGGAAAGCACACTCCAAAACCTGTGGTACCAGGGAATACAAATGTGACTGTGGAACCATCTTTTCACGGAGGGACAGTTTCATCACACACAGGGCTTTCTGTGATGCCTTAGCAGAAGAAACAGCAAGGGTAAACGCAGCATCAACCATAAACCACACATTATTAGGTGCTAACAACATTGCTTACACCCTCATGCAGCAGCAAAATCATCATCCTTTGGTTCCTAATAACATGTCAACCCATTTCTCTTCAATTTTCAAGCCAATTTCTTCATCCACTACTGATGAAATAAGCAGCAATAGCCAAACATCTTCTAGACCCTTATCCCTTTGGAACATGGGTCATCACCCTCATGACACAACAACAATAATGCCAATTACTCACAACAATTTGCATGATATTCATCAGCAAATTGGATTTGCTACAAACCCTCCTCCACCATCAATTTGGATGTTTGGAAACAAACATCCCTCCAATGGAAGCCAGCAAGAGATAATAACTAGCACTACAAGTGCTAATTCACTTCCATTAATGAACATTGTCAAGAATAATAATAATAACAATAATAATAATAATAATAATAATAACAATAATAATCATGTTGCAAACCAGCTTGTAAGTGTTCCTTCGTTGTATAGCACCCAACACCAATCCCATGATCATGATCAAACAACAACAACATCTTCATCAGCAGCAAACATGTCAGCCACAGCTTTATTGCAAAAAGCGGCTCAAATTGGATCAACTTCTTCAACTGATCCATCATCATTTCTTGGGAGCATAGGTTTGAAATGCAGTAACAATAATAACCAAGGGCAAGATGGGAATAACAAATTTTGTGGGATTTACAGTTCAAGTTGGAGTGAGCCAGAGAGCTCCACGGGTGATTTGACACAAATGCCCCCTACAAAAAGAATGCGCGTGCAGAATGAAGATGGCAGTGCAGGGGGACAAACTAGGGATTTTCTTGGTGTTGGCGTGCAAACCATTTGCCACCCTTCATCTATCACTGGCTGGATTTGA 1473 0.4189 MDDGEVSNGAFPLHHNNQTHDPTSNNPPPLKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASTINHTLLGANNIAYTLMQQQNHHPLVPNNMSTHFSSIFKPISSSTTDEISSNSQTSSRPLSLWNMGHHPHDTTTIMPITHNNLHDIHQQIGFATNPPPPSIWMFGNKHPSNGSQQEIITSTTSANSLPLMNIVKNNNNNNNNNNNNNNNNNHVANQLVSVPSLYSTQHQSHDHDQTTTTSSSAANMSATALLQKAAQIGSTSSTDPSSFLGSIGLKCSNNNNQGQDGNNKFCGIYSSSWSEPESSTGDLTQMPPTKRMRVQNEDGSAGGQTRDFLGVGVQTICHPSSITGWI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00966 490 MobiDBLite consensus disorder prediction 362 381 - -
Aip08g00966 490 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Aip08g00966 490 PANTHER F-BOX ASSOCIATED PROTEIN 17 481 - -
Aip08g00966 490 MobiDBLite consensus disorder prediction 11 30 - -
Aip08g00966 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Aip08g00966 490 MobiDBLite consensus disorder prediction 1 43 - -
Aip08g00966 490 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 17 481 - -
Aip08g00966 490 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Aip08g00966 490 Gene3D Classic Zinc Finger 93 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00966 Aip-Chr8 11246684 11249585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00966 24 490 IDZ Gene Family AT1G03840 51.961 2.05e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip08g00966 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00966 K25870 - gmx:100778666 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00966 08 11246684 11249585 Aip08g00966 08 11246684 11249585 ECH