Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00963 ATGCCTCTCTTATTCTTCTTCTTCTTCTTCTTTGTTACTCCCACTCTCTCACTCAACCAAGAAGGCCTGCTCCTTCTAGAAGCCAAGAACCAACTACTTCCATCATCCTCCTCCTCCCTCGCCGACTGGAACCCCCGCGACCCCACCCCATGCAACTGGACCTGCGTCACATGCAACCCCAATACCTCCCACGTCATCTCCCTCTCCCTCTCCTCTCTCTCCCTCTCCGGCCCTATTCCCTCGTCCCTCTGCCGCCTACCCTCCTCCCTTCTCCACCTCGACCTCTCCTTCAACAACTTTTCCGCTTCTATTCCCCCTTCCTTCTCTCTCTTCCCCAACCTCCGATCCCTCAACCTCGTCGAAAACCTCCTCAACGGAACCATCCCTTCGTTTCTCACCAACCTCACCACCTTAACCTTCCTCCACTTGTCCTACAACCCTTTTCTTCCTGCTCCGTTACCGAGTGAGTTCGGCAACATGACCAACCTCCAGGACTTGTCTCTTTCCGGCTGCAACCTCCTCGGTCCAATTCCCGCTTCATTGGGGAAGCTATCCAACCTTCGAAACCTTGAACTAACCTATAACAGCCTCCAGGGTGCCATACCGGAGTCTCTCATCTCCGGCCTCACCAGCATCGTGTTTCTCGAGCTCTATGAAAACTCGCTCTCTGGTTCATTGCCACGTGGCGCTGTGTGGAACAACCTCACCCATTTGGAAGGCTTCGACGCCTCCGGGAACGACTTGACAGGGACGATTCCCTCCGAGTTGACTCGGTTGAAGAAACTCGGTTCTCTCAACTTGTTCAATAACAACCTCGAAGGCTCTCTGCCGGAGAGTATCGTCGAGGCCGAGAGCTTGTACGAGCTTAAACTGTTCAACAACTCGCTCAATGGGTCGTTGCCGAGTCAACTCGGGAGCAACTCGCCCCTGCAGACACTCGACCTCTCGTACAACAACTTCTCCGGCGAGATTCCGGCGGGATTGTGCCGCCGGGGAGCGATGCAGGAGATCATGCTAATTTACAACTCGTTCTCCGGCAGAATCCCCGAGAGTCTGGGGGATTGCAGGAGCTTGATGAGGGTTCGAATAAGGAACAATAACATTTCGGGAACTGTTCCCGATGCTATGTGGGGACTGCCACACCTTTTTCTTCTGGAGCTTGATGATAATTCCCTTACTGGGTCGATTTCTACTTCTATTTCTGGCGCAAGCAACATGTCAAGTTTGTCGCTTTCCTTCAACATGTTCTCAGGGTCTGTTCCCCAGGAAATTGGGAATTTGGACAACCTTGTTCAGTTTGTCGCCAGCCATAATAGGCTATCTGGTCGGATTCCGACGAGTGTTGTGAAATTGAGTCAGTTGGGGAAGCTTGTGATTAGTGATAATGAGCTTTCGGGTGAGATACCTTTGGGGATTAGTGCTTTGGAAAAGCTTAATGATCTTGATTTGTCCAATAATAAGCTTGATGGTAACATTCCAAGTGAATTAGGAACCTTGCCGGTGCTTAATTATCTTGATCTTTCAGGGAATCTTTTCTCCGGTAGGATCCCAATTGAGCTGCAGAATTTGAATCTTAATTTGCTGAATTTGTCGAATAATCAGCTTTCAGGGGAGATCCCTAAAGAATTCGACAATGAGAATTACAAGAAGAGTTTTCTTGGAAATCCAGGGCTGTGTAGTTCTTCTTCAGTCTCTGGGCTCTGTCAAAATTTAGGTGAGAAGAAGAAGAACAAGATAAAGTATGATTGGGTTTTCAGGTTCATATTTGTGCTTGCTGGAATTGTGTTTGTTGTTGGGGTAACATGGTTTTGGTTCAAATTTAGGAGCATTAAGAAGATAAAGAAGAAAGTGATGCCTAACATGTTAAAATGGAGATCTTTTCACAAACTTGGATTCAGTGAGTATGAGGTTGTGAAGTTGCTGAGTGAAGACAATGTCATAGGTAGTGGAGCATCCGGGAAAGTTTACAAGGTTGTCCTGAGCAATGGTGAAGCTGTGGCAGTGAAGAAATTATGGGGACCAAAAAACAGGACTACTGTTTCTGAAAAAGATGGTTTTTTTGAAGCTGAGGTGGAAACATTGGGAAAAATCAGGCACAAGAATATTGTGAGGCTATGGTGTTGTTGTAACAGTGGTGATAGCAAGCTCTTAGTTTATGAGTACATGCCTAATGGAAGCCTTGCTGATTTGCTTCACAGTAGCAAGAGAAGCTTGTTGGATTGGCCAATTAGGTACAGAATTGCCATTGATGCTGCTGAGGGGCTTTCTTATTTGCATCACTATTGTGTTCCTCCTATTGTTCATAGGGATGTCAAATCCCACAATATATTGCTTGATGAAGACTTTGGAGCAAAAGTTGCAGATTTTGGTGTGGCCAGAACTTTTAGCAGGGTTACCCAAGGTGCAGAATCTATGTCTGCAATTGCCGGATCTTATGGTTACATAGCACCAGAATATGCTTACACTCTAAGAGTGAATGAGAAGAGTGACATCTATAGTTTTGGAGTGGTAATTTTAGAATTGGTAAGTGGGAGAGCTCCACTTGATCCAGCATATGGTGACAAAGATTTGGTGAAATGGGTTTCTTCCACATTGGAGCAGAGTGGAGAGGATCAAGTGATTGATCCAATTATGGATGTTAAGTACAAGGGAGAAATCATCAAGGTACTAAACATAGGGCTCCTTTGCACAAACCCTCTTCCCATAAACCGGCCTTCAATGCGCAAGGTGGTGACAATGCTGCATGAAATATCTGCAATTCCCAGAACAACAAGTGGAAAATTGTCCCCTTATTATCAAGAAGAGGCATCTGATAATGAAAATCATCATGGAAACACGGTTTGA 2844 0.462 MPLLFFFFFFFVTPTLSLNQEGLLLLEAKNQLLPSSSSSLADWNPRDPTPCNWTCVTCNPNTSHVISLSLSSLSLSGPIPSSLCRLPSSLLHLDLSFNNFSASIPPSFSLFPNLRSLNLVENLLNGTIPSFLTNLTTLTFLHLSYNPFLPAPLPSEFGNMTNLQDLSLSGCNLLGPIPASLGKLSNLRNLELTYNSLQGAIPESLISGLTSIVFLELYENSLSGSLPRGAVWNNLTHLEGFDASGNDLTGTIPSELTRLKKLGSLNLFNNNLEGSLPESIVEAESLYELKLFNNSLNGSLPSQLGSNSPLQTLDLSYNNFSGEIPAGLCRRGAMQEIMLIYNSFSGRIPESLGDCRSLMRVRIRNNNISGTVPDAMWGLPHLFLLELDDNSLTGSISTSISGASNMSSLSLSFNMFSGSVPQEIGNLDNLVQFVASHNRLSGRIPTSVVKLSQLGKLVISDNELSGEIPLGISALEKLNDLDLSNNKLDGNIPSELGTLPVLNYLDLSGNLFSGRIPIELQNLNLNLLNLSNNQLSGEIPKEFDNENYKKSFLGNPGLCSSSSVSGLCQNLGEKKKNKIKYDWVFRFIFVLAGIVFVVGVTWFWFKFRSIKKIKKKVMPNMLKWRSFHKLGFSEYEVVKLLSEDNVIGSGASGKVYKVVLSNGEAVAVKKLWGPKNRTTVSEKDGFFEAEVETLGKIRHKNIVRLWCCCNSGDSKLLVYEYMPNGSLADLLHSSKRSLLDWPIRYRIAIDAAEGLSYLHHYCVPPIVHRDVKSHNILLDEDFGAKVADFGVARTFSRVTQGAESMSAIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRAPLDPAYGDKDLVKWVSSTLEQSGEDQVIDPIMDVKYKGEIIKVLNIGLLCTNPLPINRPSMRKVVTMLHEISAIPRTTSGKLSPYYQEEASDNENHHGNTV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00963 947 SMART LRR_typ_2 259 283 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 135 159 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 184 208 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 304 331 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 88 110 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 209 233 IPR003591 -
Aip08g00963 947 SMART LRR_typ_2 475 499 IPR003591 -
Aip08g00963 947 Gene3D Phosphorylase Kinase; domain 1 611 721 - -
Aip08g00963 947 Pfam Protein kinase domain 643 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00963 947 SUPERFAMILY Protein kinase-like (PK-like) 637 915 IPR011009 -
Aip08g00963 947 Pfam Leucine rich repeat N-terminal domain 19 59 IPR013210 -
Aip08g00963 947 Gene3D Ribonuclease Inhibitor 284 569 IPR032675 -
Aip08g00963 947 Gene3D Transferase(Phosphotransferase) domain 1 722 929 - -
Aip08g00963 947 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 88 - -
Aip08g00963 947 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 89 927 - -
Aip08g00963 947 ProSitePatterns Protein kinases ATP-binding region signature. 647 670 IPR017441 GO:0005524
Aip08g00963 947 SUPERFAMILY RNI-like 61 369 - -
Aip08g00963 947 SUPERFAMILY L domain-like 276 562 - -
Aip08g00963 947 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 89 927 - -
Aip08g00963 947 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 4 88 - -
Aip08g00963 947 ProSiteProfiles Protein kinase domain profile. 641 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00963 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Aip08g00963 947 PRINTS Leucine-rich repeat signature 310 323 - -
Aip08g00963 947 PRINTS Leucine-rich repeat signature 475 488 - -
Aip08g00963 947 Gene3D Ribonuclease Inhibitor 134 206 IPR032675 -
Aip08g00963 947 Gene3D Ribonuclease Inhibitor 22 133 IPR032675 -
Aip08g00963 947 Gene3D Ribonuclease Inhibitor 207 283 IPR032675 -
Aip08g00963 947 SMART serkin_6 641 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00963 Aip-Chr8 11216945 11220359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00963 14 939 Receptor kinase-like Gene Family AT1G28440 54.427 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip08g00963 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00963 - - aip:107613214 1743.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00963 08 11216945 11220359 Aip08g00963 08 11216945 11220359 ECH