Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00961 ATGAACAAACTATTGCAGGTGGAAGGCGGTTTACCATCCCCATTTTTCAGCCGGCTTCGAATCACGTGCGGGTGTTTAATTAAGACTCTTAAACGTTATACTGATTCTGATAATGATTTGGGTGATGATTTCGATTATGAACTGAACGCACACGATGATGTTGAAGATGATGATGTTGATTCGTTGGATTTTACTAGAAAGAGTAAACAAGATTGTGGTGTAAAAAGAATAGCAGATTTAATGGTAGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAACTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATAACGTTGTGAAGGATAAGGAAGGTAAAATCATTTGCAGGCAACTTGTTTGCAATAAAGAGGGCTGGAGGAATATGAGGTATCTTGATTTGGATAATAGATCAAGGGTGGCAAGGTCACTCATGCGAACCAAGTGTCCAGCTCAGCTTAAGGTCAAGGTTGACTACGGCTGTGGTAAATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATTTGACGCCCTCCAATTTGCGCATCTCGTTCCAGCCAATCATCGTCTCACTGTTACTGATAAAGTCCAAGTGA 630 0.4095 MNKLLQVEGGLPSPFFSRLRITCGCLIKTLKRYTDSDNDLGDDFDYELNAHDDVEDDDVDSLDFTRKSKQDCGVKRIADLMVEDIWNLEFRTEDETCQFYNAYACWHGFVMRKDNVVKDKEGKIICRQLVCNKEGWRNMRYLDLDNRSRVARSLMRTKCPAQLKVKVDYGCGKWKVSCFVESHNHDLTPSNLRISFQPIIVSLLLIKSK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00961 209 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Aip08g00961 209 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00961 Aip-Chr8 11185617 11186495 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g00961 FAR1 2.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00961 - - adu:107460934 284.263