Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00958 ATGGCAAAAAAACACGCCATAGGAATCGATCTTGGCACCACGTATTCATGTGTTGCTATCTGGGAGGAGCGAAATTCTCGCGCCGAGATCATTCACAACGATCAAGGAAACAGAACAACCCCTTCTTTTGTTGCTTTCACTAATTCACAGAGATTGGTCGGTGATGCTGCCAAAAATCAGGCTTCAACCAACCCAACTAACACTGTCTTTGATGCTAAGAGGTTGATTGGTAGGAAATATAGCGATCCTGTTATTGAGAATGATTTGAAGCTTTGGCCGTTTAAGGTTGTAGCCGATGCTGAAGACAAGCCAAAGATTGTTGTTAACTATAAAGGCCAAGAAAACGAACTTACTCCTGAAGAGATTTCATCTATGATCCTCACAAAAATGAAGGACATTGCAGGGGCATTTTTGGAATCTCCTGTGACTGATGCTGTTGTTACTGTCCCTGCTTATTTCAGCCACTCTCAGCGGAAAGCCACAAAAGATGCCGGAACCATTGCCGGCCTAAATGTTATGAGGATCATCAATGAACCTACAGCTGCGGCTCTTGCTTATGGCCTTCAGAAGAGGCCTAATTGCGTCGGAAAGCGCAATGTATTTGTTTTTGATCTCGGTGGTGGCACCCTTGACGTGTCACTCCTTACAATTAAGGGTGACACTTACCAGGTTAAGGCCACCGCCGGAGACACTCATTTAGGAGGAGAAGATTTTGACAATAGAATGGTGCGTTATCTTGCTAAAGAGTTCAAAAGGAAGTACAAAGAAGACATGAATGGGAACTCAAAAGCTTTAAGGAGGTTGAGAAATGAGTGTGAGAAAGCCAAGAGAATACTCTCATATAACAATGAAGCCACCATTGACATAGATGCTTTGTTTCAAGGCATTGACTTCCATTCAACCATGACTCGTGCCAGGTTTGAGAAACTCAACGATGATCTATTTGAAAAGTGTATGGACACAGTTAAGAGGTGTCTTGATGATGCCAGAGTCGACAAGAATCATGTACATGACTTAGTTCTTGTCGGCGGCTCATCAAGAATCCCCAAAGTTCAGAAGCTTCTGCAGAGTTTCTTTCCTGGAAAGGAACTCTGCAAGAGTATCAACCCCGACGAAGCCGTCGCTTATGGCGCCGCCGTTCAGGCTTATATGATAAATAACGGTCAGGGAGGCAATGATAGTAAGACTTTGAAGAACTTGGTCTTAATGGACGTTACTCCGCTTTCGCTGGGAACATCGATAAAAGGGGATCTCATGAGTGTTTTGATTCCAAGAAATACTCCAATTCCTGCAAAGAAAAAAGGAACATACTTCACAGATTCTGATGACCAACCTACAGTTTGCGTTGATGTGTATGAAGGAGAGAGGTTAAGAGCAAGTGAGAACAACATGCTTGGATTGTTCTCTTTCGATGTTCCTCCGGCCCCACGTGGCTTTCCAATCTATATATGTTTCGATGTAAATGAAGATGGGATCCTGAGTGTGTCTGCGAAGGAAAAACTCACCGGAAAGAAACAAGAGATTACAATAAATAATGGCACGGGAAGGTTTTCGGCCAAGGAAGTTGCGAAAATGATTGAAGAAGCTGAAATGTTGAAGGATGAAGATGAGAAGTACAAAGAGAGAGTTAAAGCAAAGAATGCTTTGGATGAATGTGTGTATAAAGTGAAGAAAGCTATCAAGGATGGGAACTTCTTCTCTAAGGTTTCTGCAATGGATAAACAGAGGATTATGGCTGCTATTAGAGAGACCAGAGATATGGTTAATAATGATGGGGTGGAGCAAGGGGAAACGTATCAGTATAAGAAGTGTTTGATGGAGTTGCAGAGTGTTACTAATGAAATAATGGACAAAATTAACAGTGATTATGAAGAAAGTGATAATGAGGATTAA 1893 0.4216 MAKKHAIGIDLGTTYSCVAIWEERNSRAEIIHNDQGNRTTPSFVAFTNSQRLVGDAAKNQASTNPTNTVFDAKRLIGRKYSDPVIENDLKLWPFKVVADAEDKPKIVVNYKGQENELTPEEISSMILTKMKDIAGAFLESPVTDAVVTVPAYFSHSQRKATKDAGTIAGLNVMRIINEPTAAALAYGLQKRPNCVGKRNVFVFDLGGGTLDVSLLTIKGDTYQVKATAGDTHLGGEDFDNRMVRYLAKEFKRKYKEDMNGNSKALRRLRNECEKAKRILSYNNEATIDIDALFQGIDFHSTMTRARFEKLNDDLFEKCMDTVKRCLDDARVDKNHVHDLVLVGGSSRIPKVQKLLQSFFPGKELCKSINPDEAVAYGAAVQAYMINNGQGGNDSKTLKNLVLMDVTPLSLGTSIKGDLMSVLIPRNTPIPAKKKGTYFTDSDDQPTVCVDVYEGERLRASENNMLGLFSFDVPPAPRGFPIYICFDVNEDGILSVSAKEKLTGKKQEITINNGTGRFSAKEVAKMIEEAEMLKDEDEKYKERVKAKNALDECVYKVKKAIKDGNFFSKVSAMDKQRIMAAIRETRDMVNNDGVEQGETYQYKKCLMELQSVTNEIMDKINSDYEESDNED 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00958 630 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Aip08g00958 630 SUPERFAMILY Actin-like ATPase domain 5 190 IPR043129 -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 5 18 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 35 47 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 57 65 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 145 165 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 208 218 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 336 352 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 368 388 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 399 418 - -
Aip08g00958 630 PRINTS 70kDa heat shock protein signature 478 494 - -
Aip08g00958 630 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 546 IPR029047 -
Aip08g00958 630 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 550 IPR029047 -
Aip08g00958 630 Coils Coil 251 271 - -
Aip08g00958 630 Gene3D - 191 365 - -
Aip08g00958 630 Gene3D - 70 125 - -
Aip08g00958 630 Gene3D - 7 382 - -
Aip08g00958 630 Gene3D Actin; Chain A, domain 4 234 317 - -
Aip08g00958 630 SUPERFAMILY Actin-like ATPase domain 197 384 IPR043129 -
Aip08g00958 630 Coils Coil 522 542 - -
Aip08g00958 630 PANTHER HEAT SHOCK PROTEIN 70KDA 4 620 IPR013126 GO:0005524|GO:0140662
Aip08g00958 630 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Aip08g00958 630 Pfam Hsp70 protein 6 619 IPR013126 GO:0005524|GO:0140662
Aip08g00958 630 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 545 622 IPR029048 -
Aip08g00958 630 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Aip08g00958 630 Gene3D - 547 621 IPR029048 -
Aip08g00958 630 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00958 Aip-Chr8 11130061 11132029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00958 6 619 Calmodulin-binding Proteins AT3G12580 60.714 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00958 K03283 - gmx:102667578 774.622