Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00944 ATGAAGCGTTATGTTTATATAAATGATGATGAATCAGCTCATGATTTATACTGTGATAATCGTATATCAAACAGAAAGTATACTGTGCTGAACTTTATTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTACAGCTATGGTCTCTCATCACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCAGTCTCTGCAACAAAAGAGGCATGGGATGATTACCATAGATACCTGTCAGACAAGAAGGCAAATGAGAAAGAAGTCTGGGTTGTCAGAAATGGCATCAAGAAACTTATCCAAGCCCAGGATATTCATGTAGGTAATATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGCTCCTCTGATCCACAAGGACTTTGCTATATAGAGACTGCTGCAATGGATGGTGAAACTGATCTGAAGACAAGAGTCATACCTTCTGCCTGCATGGGAATTGATGTTGAACTATTGCACAAAATTAAGGGTGTAATCGAGTGTCCCACTCCAAATAAAGACATCAGAAGGTTTGATGCCAACATGCGGTTGTTCCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACAGTTCTCCAGTCATGTTACTTACGGAACACTGAGTGGGCATGTGGAGTAGCTGTGTACACAGGCAAGTACATGGATAACATTATACTCATGAAATCAGATAGCAACGAAACCAAATTGGGCATGAGTAGAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCCATGATAGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTTGTTGTAATGGTTCTTGGCATAGCGGGTAATGTGTGGAAGGACACAGAAGCAAAGAAACAATGGTATGTTCTTTACCCTGATAAAGGCCCTTGGTATGAACTATTGATCATCCCTCTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTAGATCTGGTGAAGGGCCTGTATGCAAAGTTTATTGATTGGGACCATCGAATGGTTGACCTTGAGACTAGTACTCCATCCAATGCAACAAATACAGCGATAAGTGAGGACTTGGGACAAGTTGAGTACATTTTGACTGACAAGACAGGCACCTTGACTGAGAATAAGATGATATTTAGAAGATGCTGTATTAGCGGCATTTTTTATGGAAATGAAAATGGCGATGCATTGAAAGATGTAGAGCTTCTCCATGCTGTTTCCAGTGGTTCACCTGATGTTGTACAGTTTCTTACAATTATGGCAATATGTAATACCGTCATACCTACACAAAGCAAAACTGGAGATATATTGTATAAGGCACAATCTCAGGATGAGGATGCTCTTGTTCAAGCTGCTGCTCACTTGCATATGGTGTTCTTCAACAAGAGTGGAAACATTCTCGAAGTCAAATTTAACTCCTCAGTACTTCAATATGAAGTGCTGGAAACCTTAGAATTCACCTCAGACAGGAAAAGAATGTCACTAGTCTTGAGAGATTGTCAAAATGGAAAGATCCTTCTTTTGTCGAAAGGAGCAGATGAGGCTATTCTTCCTTATGCTCGTACTGGGCAGCAAACTCGGAACTTCGTTGAAGCTGTGGAACAATATGCTCACTTGGGACTACGCACACTATGTTTGGCTTGGCGGGAATTAAGAGAAGATGAATATCGAGAATGGTCTTTAATGTTTAGAGAGGCCAATAGCACTTTGGTTGACAGAGAGGTAAATGGCATTCTTGTCAATGATATTTTATACAGTAACTCTTACGAATTGAATTTCTCAGTATACTATCTATCACAGTGGAGAGTAGCTGAGGTCTGCCAAAGAATAGAACATAATTTGGAAGTTCTTGGTGTTACAGCCATAGAGGATCGTTTACAGGATGGGGTTCCTGAAACAATAGAAACTCTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACAGGAGACAAGCAGAATACTGCCATACAAATTGCCCTGTCATGCAATTTTATTTCCCCAGAGCCGAAGGGCCAGCTTCTATCAATTGATGGAAAAACGGAGGATGAGGTTCGTAGAAGTTTAGAGCGAGTGCTTCTTACAATGCGGATAACTACCTCGGAACCTAAGGATGTGGCTTTTGTTATTGATGGCTGGGCTCTTGATTTTGCACTTAATCACTACCGCAAAGCTTTCACTGAGCTGGCAATATTGTCAAGGACTGCCATATGTTGTCGCGTGACACCATCCCAAAAGGCTCAGCTTGTACAAATCTTAAAATCATGCGATTATAGAACGTTGGCAATTGGTGATGGTGGGAATGATGTAAGGATGATACAACAAGCTGATATTGGCGTGGGCATCAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGTATTGGAAAGTTCCGATTCTTGAAAAGATTAATTCTAGTCCATGGCCGCTACTCTTACAACCGGACAGCATTTCTTTCTCAGTATTCATTCTACAAATCCCTACTGATATGCTTTATCCAAATATTCTTTTCATTTATTTCAGGGGTCTCTGGAACCAGCCTCTTCAATTCTGTCAGCTTGATGGCTTATAATGTTTTCTACACAAGTGTTCCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGCGAGGAAACTGTGATTCAGCATCCTCAAATTTTATTTTATTGCCAAGCTGGGAGGCTTCTAAATCCCAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAGTAGTTGTATTTCTTATAAGCATACATGCTTATGCTTATGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCACTCTCCGGTTGTATTTGGTTGCAGGCTTTTGTAGTGGCAATGGAGACCAATTCATTTACAATATTGCAACATCTTGCTATATGGGGTAATTTAGCTGGGTTTTATGCTATCAACTGGATCTTCAGTGCTCTTCCTGCATCAGGGATGTATACAATTATGTTTCGGTTGTGTCGACAGCCGTCATATTGGATATCAATTTTTCTCATGACTGCAGCCGGGATGAGTCCAATCCTCGCTATCAAGTATTTCCGATATACATATAGACCGAGCAAAATCAACACACTTCAGCAGGCTGAACGCCTCGGGGGACCAATTTTGTCTCTTGGTACCATTGAGCCTCAACCCCGACCACTTATAGAGAAAGATGTTTCTACCCTGTCAATAACACAACCCAAGAACAGAAATCCTGTGTATGAACCTCTGTTGTCAGATTCTCCAAATGCCACCAGAAGATCATCAGGAACGCCATTTGATTTTTTTCAGTCACAGTCAAGATCATCGCTGCCTAACTACTCTAGGAACTGCAAGGATAACTGA 3435 0.409 MKRYVYINDDESAHDLYCDNRISNRKYTVLNFIPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYHRYLSDKKANEKEVWVVRNGIKKLIQAQDIHVGNIVWLRENDEVPCDLVLIGSSDPQGLCYIETAAMDGETDLKTRVIPSACMGIDVELLHKIKGVIECPTPNKDIRRFDANMRLFPPFIDNDICPLTIKNTVLQSCYLRNTEWACGVAVYTGKYMDNIILMKSDSNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEAKKQWYVLYPDKGPWYELLIIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIDWDHRMVDLETSTPSNATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDVELLHAVSSGSPDVVQFLTIMAICNTVIPTQSKTGDILYKAQSQDEDALVQAAAHLHMVFFNKSGNILEVKFNSSVLQYEVLETLEFTSDRKRMSLVLRDCQNGKILLLSKGADEAILPYARTGQQTRNFVEAVEQYAHLGLRTLCLAWRELREDEYREWSLMFREANSTLVDREVNGILVNDILYSNSYELNFSVYYLSQWRVAEVCQRIEHNLEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVRRSLERVLLTMRITTSEPKDVAFVIDGWALDFALNHYRKAFTELAILSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVIQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFLISIHAYAYDKSEMEEVSMVALSGCIWLQAFVVAMETNSFTILQHLAIWGNLAGFYAINWIFSALPASGMYTIMFRLCRQPSYWISIFLMTAAGMSPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQPRPLIEKDVSTLSITQPKNRNPVYEPLLSDSPNATRRSSGTPFDFFQSQSRSSLPNYSRNCKDN 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00944 1144 PRINTS P-type cation-transporting ATPase superfamily signature 392 406 - -
Aip08g00944 1144 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Aip08g00944 1144 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Aip08g00944 1144 Pfam Phospholipid-translocating P-type ATPase C-terminal 817 1056 IPR032630 -
Aip08g00944 1144 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 639 700 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g00944 1144 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 755 873 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g00944 1144 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1055 IPR023298 -
Aip08g00944 1144 Pfam E1-E2 ATPase 99 165 - -
Aip08g00944 1144 Gene3D - 449 590 IPR023299 GO:0000166
Aip08g00944 1144 SUPERFAMILY HAD-like 387 844 IPR036412 -
Aip08g00944 1144 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Aip08g00944 1144 SFLD p-type atpase 377 840 IPR044492 -
Aip08g00944 1144 SUPERFAMILY Calcium ATPase, transduction domain A 100 243 IPR008250 -
Aip08g00944 1144 Pfam haloacid dehalogenase-like hydrolase 390 740 - -
Aip08g00944 1144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 612 1143 - -
Aip08g00944 1144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 343 - -
Aip08g00944 1144 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 398 603 - -
Aip08g00944 1144 ProSitePatterns E1-E2 ATPases phosphorylation site. 394 400 IPR018303 -
Aip08g00944 1144 Gene3D - 75 251 - -
Aip08g00944 1144 MobiDBLite consensus disorder prediction 1096 1144 - -
Aip08g00944 1144 Gene3D - 641 829 IPR023214 -
Aip08g00944 1144 SFLD Haloacid Dehalogenase 377 840 - -
Aip08g00944 1144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 343 - -
Aip08g00944 1144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 398 603 - -
Aip08g00944 1144 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 612 1143 - -
Aip08g00944 1144 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 399 580 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00944 Aip-Chr8 10891188 10900167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00944 1 1144 Primary Pumps ATPases AT5G44240 82.040 0.0 1973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00944 K01530 - gmx:100786505 2029.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00944 08 10891188 10900167 Aip08g00944 08 10891188 10900167 ECH