Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00922 ATGCTTCTATTGGATTTTCCATTGTTGAATGATGATTTTATGAGTTCTTTTAGTGCTAGAGAGATTGAGAATGTTAATTGGGAAGCTCTTCTTAATGAAGAAGTTGCTAGGCTTCGAGGTTCTGAGGCAACAAACAAAGAAGAAGGAGGCGATTTTGATTTTGATTTTGATGATGATGACGATGATGCCCTTTCTGAGATTTCAAACCCAAGTTTGCTATCAGTTGAAATCATCACTGACACTGTGGAAGCGGCAAAGAAACCTACAGTTGCTGCCATTGATGGTCTTGCCCTGGGTGGGGGGTTAGAGCTTGCAATGGTGGAGAATAAGTCTGGTTTATCAAACTTCATTCCTATTCTCATTGAGGACAAAGAAATTTGCAGTGAGATGAGGACATTACAGCAAAGTCGGACGAGTGATGTTGATGTGACACAACTACTGAATTGCATGCAACTTGCTAGAGATGTTATTAATCAGAATCATCAGAAAGGCAGAGGCATAATTGTGCATTCTGAAACAGAAGGCTTTCGGATTGAAAAAACCTGCACCCAAGACAGCTTGCCATCAGTTTCGAGAATAAAAAGTCAGGATGTTCTATCCAGAACGGATTCAAAGTGTGGAATAATGAGAATCCCAACATTTAATGACAAAATTGATAGGATACCACTTTTGAAGAGGGAGATTATAATGAATATGGAAGAGTTGCCTAAACGATCCAGCCGGCGATATGTCGGTAGGGGATTCTTGAGCTCTCGACCAGCAATGTTTGTGATTGTTTCGGTTGCTGTTTGTCTTGCAGTATGTGTAGCCATCCTTCACCGGGGGAGGGTAAAAGAAGAGGCACAACAACTTGCTCAAATTTTTGAAACAGTTAGGTCTTTCAAGGTGAAGCGGAAATGTGGTAAAGAAAAACTAATTTTTGGAAGTGTTATAGCTCAAGATCTTGTTGACATTATCAAGGCGCAGCTTCAAAGGGAGGTGGACAAGAGAATTGTCGAACTTCTAGAGATACATGAAACCGAAGAATATATCACAGAGTTAAAGCTTTATCCGGAAGTTACAGCGAGAATAAGGTTGAATGTTTTTGCTAACTAA 1095 0.4009 MLLLDFPLLNDDFMSSFSAREIENVNWEALLNEEVARLRGSEATNKEEGGDFDFDFDDDDDDALSEISNPSLLSVEIITDTVEAAKKPTVAAIDGLALGGGLELAMVENKSGLSNFIPILIEDKEICSEMRTLQQSRTSDVDVTQLLNCMQLARDVINQNHQKGRGIIVHSETEGFRIEKTCTQDSLPSVSRIKSQDVLSRTDSKCGIMRIPTFNDKIDRIPLLKREIIMNMEELPKRSSRRYVGRGFLSSRPAMFVIVSVAVCLAVCVAILHRGRVKEEAQQLAQIFETVRSFKVKRKCGKEKLIFGSVIAQDLVDIIKAQLQREVDKRIVELLEIHETEEYITELKLYPEVTARIRLNVFAN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00922 364 Pfam Ribosomal protein L9, C-terminal domain 279 361 IPR020069 -
Aip08g00922 364 Gene3D - 277 364 IPR036791 -
Aip08g00922 364 Gene3D - 48 108 - -
Aip08g00922 364 PANTHER 50S RIBOSOMAL PROTEIN L9 274 364 IPR000244 GO:0003735|GO:0005840|GO:0006412
Aip08g00922 364 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 274 364 - -
Aip08g00922 364 SUPERFAMILY ClpP/crotonase 76 107 IPR029045 -
Aip08g00922 364 SUPERFAMILY Ribosomal protein L9 C-domain 277 363 IPR036791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00922 Aip-Chr8 10307829 10311116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00922 138 281 SBP-box Gene Family AT5G18830 30.201 2.85e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00922 K02939 - aip:107611818 246.899