LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g00899	ATGGAGGTGTCTTTGAGCGAGGCGGATGGTGATTGTGGAGGGAGTGATGGTGATGCTAACGAAGTAGAAAATTCTGATTTGGAAGACCTCGGTGGACTAAGTGTGGATGACATCCTCAAGAAGGTATGGCACATCATTGAAAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGCATGGATTCGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGACGGGAATGTTGTAAGGTACAGGTTTTTTTGTAACAAGGAAGCGTTGAGGGAGCGTAAACACTACGACAGGGTTGACCGAACAAGGGTACACAAACCGGAAACAAGAACCAACTGCAAGGCAATGTTATCGGTTTATCTTGACAAAAATGATAAGCATTGGAAGGTTAGGAAGTTAGTAACTGAACACAATCATGACCTAACACCGGCTGGAATGGTGTACCTGATTGCCAATCATCGTCGGTTAACGGAAGTTGCAAAGACTCAGATAGCCGGTATGCAAGCTCATGGTATTGCGACCTCTAAGATTGTAGGGTACATGGCTGGTATGATCGGGGGATATTCGATGTTGGGGTTCCTGAAGAAGGATGTCTACAACTATGCTGACAAAATGCGGCGCATTAAAGTAGCTGATGGCGATGCGAATTCTGCATTAGTTTATCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTTCTGACAACAGGCTCGCGAATCTGATTTGGGCCGATGGATCTAGCAGAGTCGATTACCAATTCTTTGGCGATGTTCTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGGCCGATTGTTATTTTCTCAGGATCAAACAATCATAAGCAGACCACCATATTCGGGTTTGGGTTGTTGCTTGATGAAAGTCTGGCGTCCTATCGGTGGATGCTGGAGAATTTGATGGAGATCATGTGCCGTAAGAAGCCATCTGTAGTGGTGACCGATGGGGACAAAGCTATGATAAAGGCTGTCTCTGAAGTCCTCCCCGAGTCGACGCATCGCTTGTGTGCATGGCATGTAGAGAAGAACGTCACATCGAATGTCAAGGATGATGAATTACGTGGGCTATTCAGAAGATGGTTGTACGCGGACATGGCAACAGATGTATTCGAGTCGGAATGGGAGCAGGCCATGGAAGAGTATGGACTCGGCCATAATCAGTGGTGGTGCCAGATGTATGAGAAAAAGGAGATGTGGGCAAGTAGCTATCTTCATGACAAGTTCTGCGCGGGGTACCGGACCACATCCTGCTGCGAAGGAATTAACGCATATGTAAACAAGTTTTCCAAGTCCACCCACACAATTTTTGAGCTGGTGCAATGCTTAGAGATGGTTGCCCGTGAATATCGGAATAAGGAAATGCTGCTCCAGTTTCAATCCATAAACTCGGTTCCGGTCATGACAACATGCCTGAGAAGTCTTGAACGACATGCCGCTTCGGTGTACACCAGAGAAGTTTTTGGTGATGTAAAGAAGGAGATCGAAGGGGTTGGTGCCTTGATCCTGATTACCAGAAGGAGGATCATGAATTCCATGATATACACCCTAGAGGAGTAA	1599	0.4615	MEVSLSEADGDCGGSDGDANEVENSDLEDLGGLSVDDILKKVWHIIENAYEFYRGFGKLHGFGVRKGDSGKDCDGNVVRYRFFCNKEALRERKHYDRVDRTRVHKPETRTNCKAMLSVYLDKNDKHWKVRKLVTEHNHDLTPAGMVYLIANHRRLTEVAKTQIAGMQAHGIATSKIVGYMAGMIGGYSMLGFLKKDVYNYADKMRRIKVADGDANSALVYLEGKAESDPMAIAKYNVTSDNRLANLIWADGSSRVDYQFFGDVLAFDSTYRKNKYKRPIVIFSGSNNHKQTTIFGFGLLLDESLASYRWMLENLMEIMCRKKPSVVVTDGDKAMIKAVSEVLPESTHRLCAWHVEKNVTSNVKDDELRGLFRRWLYADMATDVFESEWEQAMEEYGLGHNQWWCQMYEKKEMWASSYLHDKFCAGYRTTSCCEGINAYVNKFSKSTHTIFELVQCLEMVAREYRNKEMLLQFQSINSVPVMTTCLRSLERHAASVYTREVFGDVKKEIEGVGALILITRRRIMNSMIYTLEE	532

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g00899	532	MobiDBLite	consensus disorder prediction	1	24	-	-
	Aip08g00899	532	PANTHER	OS02G0262500 PROTEIN	37	515	-	-
	Aip08g00899	532	Pfam	FAR1 DNA-binding domain	51	141	IPR004330	-
	Aip08g00899	532	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	37	515	IPR031052	GO:0006355
	Aip08g00899	532	Pfam	MULE transposase domain	263	357	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g00899	Aip-Chr8	9878350	9879948	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip08g00899		MULE	1.1e-26	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g00899	-		-	aip:107620053	914.835