Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00896 ATGGAGGTGTCTTTGAGCGAGGCGGATGGTGATTGTGGAGGGAGTGATGGAGATGCTAACGAAGTAGAAAATTCTGATTTGGAAGACCTCGGTGGACTAAGTGTGGATGACATCCTCAAGAAGGTATGTCACAGCATTGAAAATGCATATGAGTTCTATCGGGGTTTCGGAAAATTGCATGGATTCGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGACGGGAATGTTGTAAGGTACAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGAGCGTAAACACTACGACAGGGTTGACCGAACAAGGGTACACAAACCGGAAACAAGAACCAACTGCAAGGCAATGTTATCGGTTTATCTTGACAAAAATGATAAGCATTGGAAGGTTAGGAAGTTAGTAACCGAACACAATCATGACCTGACACCGGCTGGAATGGTGCACCTGATTGCCAATCATCGTCGGTTAACAGAAGTTGCAAAGACTCAGATAGCCGGTATGCAAGCTCATGGTATTGCGACCTCTAAGATTGTAGGGTACATGGCTGGTACGATCGGGGGATATTCGATGTTGGGGTTCCTGAAGAAGGATGTCTACAACTATGCTGACAAAATGCGGCGCATTAAAGTAGCTGATGGCGATGCGAATTCTGCATTAGTTTATCTAGAGGGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTTCTGACAACAGGCTCGCGAATCTGATTTGGGCCGACGGATCTAGTAGAGTCGATTACCAATTCTTTGGCGATGTTCTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGGCCGGTTGTTATTTTCTCAGGATCAAACAATCATAAGCAGACCACCATATTCGGGTTTGGGTTGTTGCTTGATGAAAGTCTGGCGTCCTATTGGTGGATGCTGGAGAATTTGATGGAGATCATGTGCCGTAAGAAGCCATCTGTAGTGGTGACCGATGGGGACAAAGCTATGATAAAGGCTGTCTCTGAAGTCCTCCCCGAGTCGACGCATCGCTTGTGTGCATGGCATGTGGAGAAGAACGTCACATCGAATGTCAAGGATGATGAATTACGTGGGCTGTTTAGAAGATGGTTGTACGCGGACATGGCAACAGATGTATTCGAGTCGGAATGGGAGCAGGCCGTGGAGGAGTATGGACTCGGCCAGAATCAGTGGTGGTGCTAG 1215 0.4683 MEVSLSEADGDCGGSDGDANEVENSDLEDLGGLSVDDILKKVCHSIENAYEFYRGFGKLHGFGVRKGDSGKDCDGNVVRYRFFCNKEGLRERKHYDRVDRTRVHKPETRTNCKAMLSVYLDKNDKHWKVRKLVTEHNHDLTPAGMVHLIANHRRLTEVAKTQIAGMQAHGIATSKIVGYMAGTIGGYSMLGFLKKDVYNYADKMRRIKVADGDANSALVYLEGKAESDPMAIAKYNVTSDNRLANLIWADGSSRVDYQFFGDVLAFDSTYRKNKYKRPVVIFSGSNNHKQTTIFGFGLLLDESLASYWWMLENLMEIMCRKKPSVVVTDGDKAMIKAVSEVLPESTHRLCAWHVEKNVTSNVKDDELRGLFRRWLYADMATDVFESEWEQAVEEYGLGQNQWWC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00896 404 PANTHER OS02G0262500 PROTEIN 37 403 - -
Aip08g00896 404 Pfam MULE transposase domain 263 357 IPR018289 -
Aip08g00896 404 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g00896 404 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Aip08g00896 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 403 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00896 Aip-Chr8 9852707 9853921 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g00896 MULE 4.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00896 - - aip:107620053 740.339