Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00883 ATGCATCTCGTCGTCGCCATCATGCCTGTCGTCGTTTCGTGCCGACGATGCATCCAGCTGAAGGTGCAGAAAATTCTACTGTCGGACATTGTTCAGCCATGTCGAAGCTGGTCCTCCATCGCCGTCGATAGAGAGAGCTTTGGTGACCCGATCCCGTGGCTCGTCTGCCTCGCCTTCTTCTTCACCAAGGGATTCATCAAGCTCGGCCTCGCGAACCGCGTCGCGTACCAGTTCATCTCACTCTTCGGAAGCTCCTCGCTGGGGTTAGGGTACAACTTGGTCTTCAGCGAAGCGCTTCTCGCGCCGGCGATTCTATCGGTTTCAGCtagggatggcaaaaagggttga 348 0.5316 MHLVVAIMPVVVSCRRCIQLKVQKILLSDIVQPCRSWSSIAVDRESFGDPIPWLVCLAFFFTKGFIKLGLANRVAYQFISLFGSSSLGLGYNLVFSEALLAPAILSVSARDGKKG 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00883 115 Pfam Sodium:sulfate symporter transmembrane region 5 112 IPR001898 GO:0016020|GO:0022857|GO:0055085
Aip08g00883 115 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 41 113 - -
Aip08g00883 115 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 41 113 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00883 Aip-Chr8 9660903 9661334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00883 39 112 Antiporters AT5G12860 75.676 6.30e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00883 - - aip:107629031 109.768