Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00880 ATGGGGTGTTGTGTCTCAACAAGCAGTAAGAGCAGTTGTAGTAGTAAGAGCAATGGAGACTCAGACTCTCCATCTTGTTTAGAAATCGGTTTCTGTGGTCAAAAGAAAGCAAGGAGAACATTCTCTGATCATGTTGTTTCCCTGCATCAGTTATCATCCTTACCAAACAGGATTTTCTCCAATGGAAAGAGCCGGTCTTCTTGCATATTTACGCAGCAGGGTCGTAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTCATGGCAGAAGATGTGACCTTCTGTGGTGTATTTGATGGCCATGGTCCTCATGGTCACCTTGTTGCACGCAAAGTTAGGGATTCCCTGCCTATCAAACTTCTTTCTTTTTTGCATTCCGGTGAATCGAGGCGAAACGGATCAGGGAAAGCTTCTTTCAAAGGGAATATAAAGCCTGACACTGAAGAGTCTGAGAAAGATAGCTCTGATGAGGATAAAATAAATTCCATGTGGAGAGAAGCTTTCATGAAGGCATATAAGGCCATGGACAAAGAGCTGAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACTATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTCACCGGCATCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTCGAGCATCAGCAGCAAGGGTTCTGGTGGATTCTGCGGAAGTATAA 1050 0.4438 MGCCVSTSSKSSCSSKSNGDSDSPSCLEIGFCGQKKARRTFSDHVVSLHQLSSLPNRIFSNGKSRSSCIFTQQGRKGVNQDAMIVWEDFMAEDVTFCGVFDGHGPHGHLVARKVRDSLPIKLLSFLHSGESRRNGSGKASFKGNIKPDTEESEKDSSDEDKINSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRHLTDKDEFIVLASDGVWDVLSNEEVVEIVSTAPTRASAARVLVDSAEV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00880 349 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g00880 349 MobiDBLite consensus disorder prediction 144 161 - -
Aip08g00880 349 CDD PP2Cc 65 347 IPR001932 -
Aip08g00880 349 ProSiteProfiles PPM-type phosphatase domain profile. 66 349 IPR001932 -
Aip08g00880 349 SUPERFAMILY PP2C-like 57 347 IPR036457 -
Aip08g00880 349 SMART PP2C_4 55 344 IPR001932 -
Aip08g00880 349 MobiDBLite consensus disorder prediction 130 161 - -
Aip08g00880 349 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 347 - -
Aip08g00880 349 Gene3D - 58 348 IPR036457 -
Aip08g00880 349 Pfam Protein phosphatase 2C 139 345 IPR001932 -
Aip08g00880 349 PANTHER ALPHABET, ISOFORM E-RELATED 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00880 Aip-Chr8 9636345 9638070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00880 1 347 PP2C-type Phosphatase Gene Family AT1G03590 72.911 2.04e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00880 - - gmx:100813306 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00880 08 9636345 9638070 Aip08g00880 08 9636345 9638070 ECH
Aip08g00880 08 9636345 9638070 Aip03g01707 03 20693816 20698400 PCT