Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00875 ATGGGTGAGAAGAGATCTGCTTCAAAGTACAAGAGAGTGAAGATCCATGAACTAGTTCTTTTGGGATTTGTTTTGATCTGCACTGTTCAATTTTCATTTGCTGACACTAATCCTAGTGATGTTGCTGCAATCAATGGCCTATATACTGCATTGGGAAGCCCTCCTCTTCCTGGGTGGGTTTCGAGTGGCGGAGACCCTTGTGCACAAGGGTGGCAGGGTGTTCAATGTAATGGCTCAGTCATACAAGAAATAATTTTGAATGGTGCAAATTTGGGAGGAGAACTGGGTGAAAGCTTGGGATCCTTTGTTTCTATCAGAGCAATAGTTCTAAATAACAACCAGATTGGGGGAAGTATTCCGTCCAGTTTGCCAGTCACCTTGCAAAACCTTTTTCTTTCAGACAACCAGCTCACCGGAAGTATTCCTCCCTCGTTATCCTCATTGCCTGAACTGACTGACATGTCTCTCAATGACAATCTTTTAACAGGAGAAATACCAGATTCTTTTCAGTCACTTCAGAAATTGATCAATCTAGATTTATCCAATAATAATCTGAGTGGGGAGTTGCCCCCAACTATGGAGAATTTATCAGCTCTGACCTCTGTACATTTACAGAACAACAAACTGTCCGGGACCCTGGACGTTTTACAAGACCTTCCACTGAAAGATTTTGTATACCATATTATGACTTCAATAATGCATGGTGATATTTTATTATGCAGAAATGATGGAAATCTGTTTAATACTACTTTAGCTCCGTCTCTTCCACCTCGTTCTCCGGGGACACCATCACCATCAGGAACTGTGGTTTCTGGGGTGCCATCTTCTGCTGGACGCATACCAACTAAACAGGCTGATGGACCAACTGCAGCAAAGGAATCAAATTCAGGGAAGTCAAAAGGGAGAACCAAAAGGGTTGTTTGGATAACCATTGCTAGTATACTAGGAGCTGTTATTGTGGCACTTGCGCTCCTTCTATTTGTTCCACACTGTAGAAGAAGGGAACAAGTTGACAGAACTTCCAAGAAACATCAAATTGGTGCTTTTGGAGGTGAAGCCCAGAATCCTAGAAACTATGAAGCCATGGTTCAACCACCTAGTCAAGCTGAGAAATTACCAAAAGGAGCTGCTGTGAAGCCTAAAGAGAAGCACAATGCAGATACCAGGAAAATGGCTACTACTCCAAGGCCACAAGATGATCAAGATGTGCAAAAAATGGAACCATTACCCAAGCTTTTGGTTGATCATGAGATTGATATGAGTGGAATAGATTCATTTTCAATGCCTTCTCCACCCCTACCCCCACCATCTCCGCCACCGGTTGCTGAGAGGGTGATTGTTGAGCCAGCTAAATTCCATGCAGAGGCTAACACCAATACTTCCAACAAACGTCCGGTTCTTCCCATTTTTGCGAAATCTTTCACCATTGCATCACTTCAACAGTATACAAATAGCTTTTCTCAAGAGAATCTTATAGGACTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCTAATGGAAAGATACTTGCTGTCAAGAAACTAGACAAGAGAGTTTCTGATCACCAGAAGGACGATGAGTTTCTTGAATTGGTAAATGGTATTGACAAAATACGGCATGCAAATATTGTTGAACTCATTGGATACTGTGCAGAGCATGGCCAAAGGCTTCTGATTTATGAATACTGCAGTAACGGATCACTCCAGGATGCAATCCATTCAGATGATGAATTTGGAACAAGATTGTCATGGAATACTCGTATTCGGATAGCACTAGGAGCTGCTAGAGCCTTAGAGTATTTGCATGAGCAATGTCAGCCACCAATTGTGCACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATCTATCTGTCCGCGTCTCTGAATGTGGTTTGGCTCCATTGATAACTTCGGGTTCTGTAAGTCAGCTCTCAGGACAACTGCTAACAGCCTATGGCTACGGGGCTCCAGAATTTGAGTCCGGAATTTACACCTACCAAAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACTGGCCGAAAGTCCTATGACAGGTCGCGCCCTCGAGGGGAGCAGTTTCTGGTAAGATGGGCTATTCCTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAACGGAGAATACCCTGCGAAATCATTGTCGAATTTCGCAGACATTATCTCTCGATGTGTTCAGTCAGAGCCAGAATTCAGGCCAGCAATGTCAGAGGTTGTCCTGTACTTGCTAAACATGATAAGGAGGGAATCTCAGCAATCCGAATCAAGCGAAAAATGA 2331 0.4311 MGEKRSASKYKRVKIHELVLLGFVLICTVQFSFADTNPSDVAAINGLYTALGSPPLPGWVSSGGDPCAQGWQGVQCNGSVIQEIILNGANLGGELGESLGSFVSIRAIVLNNNQIGGSIPSSLPVTLQNLFLSDNQLTGSIPPSLSSLPELTDMSLNDNLLTGEIPDSFQSLQKLINLDLSNNNLSGELPPTMENLSALTSVHLQNNKLSGTLDVLQDLPLKDFVYHIMTSIMHGDILLCRNDGNLFNTTLAPSLPPRSPGTPSPSGTVVSGVPSSAGRIPTKQADGPTAAKESNSGKSKGRTKRVVWITIASILGAVIVALALLLFVPHCRRREQVDRTSKKHQIGAFGGEAQNPRNYEAMVQPPSQAEKLPKGAAVKPKEKHNADTRKMATTPRPQDDQDVQKMEPLPKLLVDHEIDMSGIDSFSMPSPPLPPPSPPPVAERVIVEPAKFHAEANTNTSNKRPVLPIFAKSFTIASLQQYTNSFSQENLIGLGMLGSVYRAELPNGKILAVKKLDKRVSDHQKDDEFLELVNGIDKIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDAIHSDDEFGTRLSWNTRIRIALGAARALEYLHEQCQPPIVHRNFKSANILLDDDLSVRVSECGLAPLITSGSVSQLSGQLLTAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRKSYDRSRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNGEYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQSESSEK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00875 776 Gene3D Phosphorylase Kinase; domain 1 449 563 - -
Aip08g00875 776 MobiDBLite consensus disorder prediction 375 404 - -
Aip08g00875 776 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Aip08g00875 776 Pfam Protein tyrosine and serine/threonine kinase 489 758 IPR001245 GO:0004672|GO:0006468
Aip08g00875 776 MobiDBLite consensus disorder prediction 251 299 - -
Aip08g00875 776 MobiDBLite consensus disorder prediction 336 404 - -
Aip08g00875 776 Gene3D Transferase(Phosphotransferase) domain 1 564 776 - -
Aip08g00875 776 MobiDBLite consensus disorder prediction 264 278 - -
Aip08g00875 776 ProSiteProfiles Protein kinase domain profile. 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00875 776 SUPERFAMILY L domain-like 37 213 - -
Aip08g00875 776 PANTHER OS01G0253100 PROTEIN 24 775 IPR045271 GO:0004714|GO:0006468
Aip08g00875 776 SUPERFAMILY Protein kinase-like (PK-like) 462 760 IPR011009 -
Aip08g00875 776 Gene3D Ribonuclease Inhibitor 38 234 IPR032675 -
Aip08g00875 776 ProSiteProfiles Leucine-rich repeat profile. 126 149 IPR001611 GO:0005515
Aip08g00875 776 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Aip08g00875 776 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 24 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00875 Aip-Chr8 9568799 9573270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00875 31 774 Strubbelig Receptor Gene Family AT4G03390 60.130 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aip08g00875 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00875 - - gmx:100811490 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00875 08 9568799 9573270 Aip08g00875 08 9568799 9573270 ECH
Aip08g00875 08 9568799 9573270 Aip03g01694 03 20456615 20459000 PCT