Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00872 ATGGAGAGCGAGTGTGAGATGAGAGAAGAGAATAATAATAATAATAATAATGGGTTTTGTGTGTTCAGTGATGATGAGCTTAAGGATGTGAGTGGTGTGAAGCGTGTTGGTGGTGACTGTGTTGAAGTCACGTGCGGATGCACTAGTCACAGATATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCTCTAATGGCTGCCTCCAAATCTCTTGTGAATGCACTCCTGGTTGCAACGAAGACAATATGACTCCTTCTGCATTTGAGAAGCACTCTGGAAGAGAGACAGCGAGGAAATGGAAGAATAATATTTGGGTAATAGTTAATGGTGAGAAGGTTCCATTATTCAAAACAGTTCTACTCAAGTACTATAATAAAGTTTCCAAAGCTGCAAGCAATACTGGAAATGTTCTGATCATCCATATGATAAAATTACATGTGAGAATGAAGAAGAGAGAGCAAGTAGAAGAGTTTACAGAGGCTGCACACGATCACCAACATGCAAAGGATGCACAACATGTGTGTGCTTTGGCTGTAATGTATGTCGCTTTTCGGATTGCACTTGTCAAACTTGCACTGATTTTACATGGAATGCCAAAGCTGAGTAGAGGGATCCATCATCATCATCTTCTTCTGATGAGTTACTTAGCACCTTTCTTTTGA 660 0.4061 MESECEMREENNNNNNNGFCVFSDDELKDVSGVKRVGGDCVEVTCGCTSHRYGDAVGRLRVFSNGCLQISCECTPGCNEDNMTPSAFEKHSGRETARKWKNNIWVIVNGEKVPLFKTVLLKYYNKVSKAASNTGNVLIIHMIKLHVRMKKREQVEEFTEAAHDHQHAKDAQHVCALAVMYVAFRIALVKLALILHGMPKLSRGIHHHHLLLMSYLAPFF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00872 219 ProSiteProfiles SAND domain profile. 25 114 IPR000770 GO:0003677
Aip08g00872 219 Gene3D - 37 133 IPR010919 -
Aip08g00872 219 PANTHER PROTEIN ULTRAPETALA 1 12 133 IPR020533 -
Aip08g00872 219 PANTHER PROTEIN ULTRAPETALA 1 12 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00872 Aip-Chr8 9439374 9442033 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Aip08g00872 SAND 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00872 - - ahf:112771653 256.914