Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00865 ATGTCATGGTCACGTGAACTAGCTAGACCAAAAACGGTCGAGCCATCGCTGTTGCCGTCCAATCCATCTTCCAGCGTCGTTCGTAGGCTCTCCCTCCCCGTCTCCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTTCTCTCGTCGAGTGGTTGTCAGCGCTGTGGTGCTCCATCCCCCCTGCATCCTCCACTTCCAGAGTAACAATGGAGCCTCAGACTCAGGGGTTATAGGCTATATTTGTTCTGTTTTGTGCTACAAGTATGTTGGTGTAGCTAAGATTCATGCCAATTTGGAAGCATCAAATAGTCAAAGACATATAAGTGATCAAAATGTGCATAATGTTAGTGATCATGTAGATGAAGACGTAACTTCTGATGCGGTGGATATGGATCAATATCGCATAAACTCTTGGGAAGATATTGGTAAGATTGATTTTTCAAGTCTATCTATGAAAAATATTTGTCAATTGCACTTTGCTGATCTTGGCTTGGCATTCGAATTTTATAATTCATATGCCAAGAAGAGGGGCTTCAGTGTGCGAAAGAGTAGGAGTAGAATAGTTGATGGAAAAGTTAGAGAAAAAGTATATGTTTGTTCTTGTGAAGGGTATAGATTAGAAAAATGGAACCATATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATGTTTTCTTCGATGCGATAACTGAGAGTTGGGTAGTGAGATATTTTTGTGATGAACACAACCATGATCTTGTTGTTCCAAAGCTAGCAAGAATGTTAAGATCTCACAAGCAAATGACTGAGCCTGACATTAGTCAAATGAACCATATGAAAGAGGTGGGGATCAGCATACCAAACATATTTGGGTCATTAGCTAGCCAGTGTGGTGGGTACGAGAACGTTAATTTTTCAATTAAGGATATGCACAATCAAGTTGCGAAGCAAAGAAGACAATTACCTGATGATTTAACCTCTGCAATGGCTTACCTGGAAACGCTAGCAGCAAGGGATCGAAACTTGTTCTATAGTGTTGAAAAGGGCAGAGAAGGAGTGTTTCGGCAAATTTTTTAG 1083 0.409 MSWSRELARPKTVEPSLLPSNPSSSVVRRLSLPVSSSLFSLLSSLFSRRVVVSAVVLHPPCILHFQSNNGASDSGVIGYICSVLCYKYVGVAKIHANLEASNSQRHISDQNVHNVSDHVDEDVTSDAVDMDQYRINSWEDIGKIDFSSLSMKNICQLHFADLGLAFEFYNSYAKKRGFSVRKSRSRIVDGKVREKVYVCSCEGYRLEKWNHMKNRVREPKPETRCGCMSKLHVFFDAITESWVVRYFCDEHNHDLVVPKLARMLRSHKQMTEPDISQMNHMKEVGISIPNIFGSLASQCGGYENVNFSIKDMHNQVAKQRRQLPDDLTSAMAYLETLAARDRNLFYSVEKGREGVFRQIF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00865 360 Pfam FAR1 DNA-binding domain 167 256 IPR004330 -
Aip08g00865 360 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 111 279 - -
Aip08g00865 360 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 111 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00865 Aip-Chr8 9301810 9305737 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g00865 FAR1 2.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00865 - - ahf:112719698 524.628